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  5. Sacu_v1.1_s0010.g004683

Sacu_v1.1_s0010.g004683


Description : not classified & original description: CDS=335-1009


Gene families : OG0006946 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0010.g004683

Target Alias Description ECC score Gene Family Method Actions
AT3G12930 No alias Lojap-related protein 0.03 OrthoFinder output from all 47 species
Ala_g08821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08779 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g02409 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01020411001 No alias Protein Iojap, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g09714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_32740g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_7988256g0010 No alias Protein Iojap, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp2g04320.1 No alias Protein Iojap, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g13808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53876 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e034562_P001 Zm00001e034562 Protein Iojap, chloroplastic OS=Zea mays... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!