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  5. Ehy_g05994

Ehy_g05994 (PAT1)


Aliases : PAT1

Description : GRAS-type transcription factor & original description: none


Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g05994

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00136400 PAT1,... RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
AMTR_s00088p00161000 PAT1,... RNA biosynthesis.transcriptional activation.GRAS... 0.05 OrthoFinder output from all 47 species
AMTR_s00186p00018500 SCL1,... RNA biosynthesis.transcriptional activation.GRAS... 0.05 OrthoFinder output from all 47 species
AT4G17230 SCL13 SCARECROW-like 13 0.05 OrthoFinder output from all 47 species
Ala_g02325 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12263 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21753 PAT1 GRAS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g50028 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05233 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G109900.1 PAT1, Ceric.01G109900 GRAS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.28G067400.1 PAT1, Ceric.28G067400 GRAS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g02729 PAT1 GRAS-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g16560 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030047001 PAT1 RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
LOC_Os07g36170.2 PAT1, LOC_Os07g36170 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
LOC_Os07g39470.1 PAT1, LOC_Os07g39470 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Len_g12269 PAT1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14339 PAT1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20939 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28608 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30488 PAT1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_9826431g0010 SCL1 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Msp_g27471 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06251 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10322 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g054170.4.1 SCL13, Solyc05g054170 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Solyc06g035620.3.1 PAT1, Solyc06g035620 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Solyc12g005340.3.1 PAT1, Solyc12g005340 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Zm00001e031707_P001 SCL1, Zm00001e031707 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 262 630
No external refs found!