Sacu_v1.1_s0008.g003998 (AMY3, ATAMY3)

Aliases : AMY3, ATAMY3

Description : alpha amylase & original description: CDS=136-3117

Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0008.g003998
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00105470	AMY3, ATAMY3,...	Carbohydrate metabolism.starch...	0.05	OrthoFinder output from all 47 species
Als_g15129	AMY3, ATAMY3	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g49597	AMY3, ATAMY3	alpha amylase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g61164	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene13966.t1	AMY3, ATAMY3,...	alpha amylase & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene52326.t1	AMY1, ATAMY1,...	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g20696	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g67761	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g16674	AMY3, ATAMY3	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g22820.1	AMY3, ATAMY3	alpha amylase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
MF	GO:0035596	methylthiotransferase activity	IEP	HCCA
MF	GO:0050497	alkylthioltransferase activity	IEP	HCCA
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002109	Glutaredoxin	172	236
IPR006047	Glyco_hydro_13_cat_dom	627	908
IPR012850	A-amylase_bs_C	929	991

External Links

No external refs found!