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  5. Sacu_v1.1_s0007.g003736

Sacu_v1.1_s0007.g003736


Description : deubiquitinase *(OTU3-4) & original description: CDS=39-1175


Gene families : OG0001848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001848_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0007.g003736

Target Alias Description ECC score Gene Family Method Actions
Ehy_g09041 No alias deubiquitinase *(OTU3-4) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13173 No alias deubiquitinase *(OTU3-4) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g00822 No alias deubiquitinase *(OTU3-4) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05359 No alias deubiquitinase *(OTU3-4) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14762 No alias deubiquitinase *(OTU3-4) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39135 No alias deubiquitinase *(OTU3-4) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48985 No alias deubiquitinase *(OTU3-4) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003323 OTU_dom 244 370
No external refs found!