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  5. Sacu_v1.1_s0006.g003446

Sacu_v1.1_s0006.g003446


Description : not classified & original description: CDS=1-1437


Gene families : OG0000402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003446

Target Alias Description ECC score Gene Family Method Actions
Adi_g055727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40689.t1 Aspi01Gene40689 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40690.t1 Aspi01Gene40690 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024716001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.04 OrthoFinder output from all 47 species
LOC_Os04g35430.1 LOC_Os04g35430 component IDM1 of ROS1-recruitment complex. PHD finger... 0.03 OrthoFinder output from all 47 species
Len_g15009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g31270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e031101_P001 Zm00001e031101 PHD finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 74 124
IPR000182 GNAT_dom 327 430
No external refs found!