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  5. Sacu_v1.1_s0006.g003181

Sacu_v1.1_s0006.g003181 (CYCT1;4)


Aliases : CYCT1;4

Description : regulatory component *(CYCT) of CTDK-I polymerase-II kinase complex & original description: CDS=1-1830


Gene families : OG0000467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003181
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00215360 CYCT1;4,... RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Als_g12540 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Aop_g02220 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aop_g04927 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0095.g043634 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Dac_g07410 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.04 OrthoFinder output from all 47 species
Dcu_g01600 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Gb_13680 CYCT1;4 cyclin (CYCT). regulatory component of CTDK-I... 0.02 OrthoFinder output from all 47 species
LOC_Os12g30020.2 CYCT1;4, LOC_Os12g30020 cyclin (CYCT). regulatory component of CTDK-I... 0.03 OrthoFinder output from all 47 species
MA_8507811g0010 No alias cyclin (CYCT) 0.02 OrthoFinder output from all 47 species
Mp3g00720.1 CYCT1;4 cyclin (CYCT). regulatory component of CTDK-I... 0.05 OrthoFinder output from all 47 species
Nbi_g12236 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Ppi_g02214 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Spa_g15172 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Tin_g12590 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 55 185
No external refs found!