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  5. Sacu_v1.1_s0006.g002954

Sacu_v1.1_s0006.g002954


Description : regulatory component *(RPN7) of 26S proteasome & original description: CDS=1-1161


Gene families : OG0004513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004513_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g002954
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Als_g13037 No alias regulatory component *(RPN7) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Als_g48348 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68843.t1 Aspi01Gene68843 regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.75 No alias Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Cre13.g581450 No alias Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Pir_g01571 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Spa_g50785 No alias regulatory component *(RPN7) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e007775_P001 Zm00001e007775 regulatory component RPN7 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR045135 Rpn7_N 63 236
IPR000717 PCI_dom 252 354
No external refs found!