Sacu_v1.1_s0004.g002422 (EMB2001)

Aliases : EMB2001

Description : not classified & original description: CDS=79-1041

Gene families : OG0001817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001817_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0004.g002422
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g004442	EMB2001	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g025576	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g29056	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g03254	EMB2001	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_311787g0010	No alias	GTP-binding protein At2g22870 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Nbi_g17266	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g11076	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	HCCA
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	HCCA
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	HCCA
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
MF	GO:0070566	adenylyltransferase activity	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	142	259

External Links

No external refs found!