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  5. Sacu_v1.1_s0004.g002118

Sacu_v1.1_s0004.g002118


Description : not classified & original description: CDS=1-1338


Gene families : OG0001274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001274_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0004.g002118

Target Alias Description ECC score Gene Family Method Actions
AT3G21600 No alias Senescence/dehydration-associated protein-related 0.03 OrthoFinder output from all 47 species
Adi_g024818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12516 ERD7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g13840.2 ERD7, LOC_Os03g13840 Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.02 OrthoFinder output from all 47 species
Nbi_g10580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g28690 ERD7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07330 ERD7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e038603_P001 ERD7, Zm00001e038603 Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
InterPro domains Description Start Stop
IPR009686 Senescence/spartin_C 246 413
No external refs found!