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  5. Sacu_v1.1_s0002.g000927

Sacu_v1.1_s0002.g000927 (ERMO2, SEC24A)


Aliases : ERMO2, SEC24A

Description : component *(Sec24) of Sec23/24 cargo adaptor subcomplex & original description: CDS=1-3372


Gene families : OG0002578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002578_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g000927
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00045940 ERMO2, SEC24A,... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
AT3G07100 ERMO2, SEC24A Sec23/Sec24 protein transport family protein 0.03 OrthoFinder output from all 47 species
Adi_g104712 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Als_g31835 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Cba_g17585 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Cba_g27013 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Cre02.g091150 ERMO2, SEC24A Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Dcu_g09947 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Dcu_g41600 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
GSVIVT01014261001 ERMO2, SEC24A Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 OrthoFinder output from all 47 species
LOC_Os04g04020.1 ERMO2, SEC24A,... component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Lfl_g03448 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
MA_10434705g0010 ERMO2, SEC24A component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Mp7g13560.1 ERMO2, SEC24A component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Msp_g47860 ERMO2, SEC24A component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Sam_g18078 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Solyc02g082220.3.1 ERMO2, SEC24A,... component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Zm00001e008766_P001 ERMO2, SEC24A,... component Sec24 of Sec23/24 cargo adaptor subcomplex 0.04 OrthoFinder output from all 47 species
Zm00001e040573_P001 ERMO2, SEC24A,... component Sec24 of Sec23/24 cargo adaptor subcomplex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006895 Znf_Sec23_Sec24 428 466
IPR006900 Sec23/24_helical_dom 840 944
IPR006896 Sec23/24_trunk_dom 503 739
IPR012990 Sec23_24_beta_S 745 828
No external refs found!