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  5. Sacu_v1.1_s0001.g000453

Sacu_v1.1_s0001.g000453


Description : non-SNARE-type phytolongin & original description: CDS=1-918


Gene families : OG0001363 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001363_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000453

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene47691.t1 Aspi01Gene47691 non-SNARE-type phytolongin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0288.g063226 No alias non-SNARE-type phytolongin & original description: CDS=233-1138 0.02 OrthoFinder output from all 47 species
Ceric.05G025100.1 Ceric.05G025100 non-SNARE-type phytolongin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.05G081100.1 Ceric.05G081100 non-SNARE-type phytolongin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.25G056300.1 Ceric.25G056300 non-SNARE-type phytolongin & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g01384 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03604 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g02923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12588 No alias non-SNARE-type phytolongin & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028637_P003 Zm00001e028637 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e029159_P001 Zm00001e029159 non-SNARE-type phytolongin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 56 129
No external refs found!