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  5. Sacu_v1.1_s0001.g000002

Sacu_v1.1_s0001.g000002 (ATISA1, ISA1)


Aliases : ATISA1, ISA1

Description : not classified & original description: CDS=779-2986


Gene families : OG0001139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000002
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00193210 ATISA1, ISA1,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
AT2G39930 ATISA1, ISA1 isoamylase 1 0.02 OrthoFinder output from all 47 species
Aev_g17250 DBE1, ATISA2, BE2, ISA2 component *(ISA2) of ISA1-ISA2 isoamylase heterodimer &... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000550 ATISA3, ISA3 starch-debranching isoamylase *(ISA3) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021589.4 ATISA3, ISA3 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004730 pseudouridylate synthase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 75 169
IPR006047 Glyco_hydro_13_cat_dom 239 305
No external refs found!