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  5. Azfi_s4053.g117827

Azfi_s4053.g117827 (RHF2A)


Aliases : RHF2A

Description : regulatory E3 ubiquitin ligase *(RHF) & original description: CDS=219-1331


Gene families : OG0001882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s4053.g117827
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Cba_g22945 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os11g36430.3 RHF2A, LOC_Os11g36430 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Lfl_g22541 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.04 OrthoFinder output from all 47 species
MA_89641g0010 RHF2A no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0213.g025975 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Sam_g26741 No alias regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g079810.4.1 RHF1A, Solyc01g079810 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc06g073860.2.1 RHF2A, Solyc06g073860 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc06g073880.3.1 RHF2A, Solyc06g073880 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g10133 RHF2A regulatory E3 ubiquiTin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!