Heatmap: Cluster_10 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
-1.09 -2.79 -0.99 -0.73 0.02 -1.64 -0.63 -0.78 0.11 1.33 1.13 1.43 -2.06
-0.74 -2.76 -0.44 -0.26 -0.06 -0.43 -0.55 -0.67 -0.01 1.0 0.99 0.99 -0.51
-0.78 -2.41 -0.78 -0.8 -0.55 -0.52 -0.62 -0.68 -0.28 1.1 1.27 1.28 -0.72
-1.21 -1.94 -0.77 -0.5 -0.15 -0.4 -0.07 -0.47 -0.22 0.99 1.12 1.08 -0.88
-0.85 -2.53 -0.37 -0.39 0.07 -0.63 -0.6 -0.4 -0.09 1.0 0.85 0.96 -0.11
-0.61 -1.14 -0.25 -0.07 0.11 -0.4 -0.73 -0.97 -0.71 0.98 0.93 1.0 -0.61
-0.96 -1.23 -0.0 0.3 -0.54 -0.34 -0.68 -1.33 -0.76 0.69 1.06 1.08 -0.12
-1.12 -1.4 -0.48 -0.62 -0.0 -0.67 -0.79 -0.86 -0.49 1.02 1.06 1.11 0.1
-1.08 -1.34 -0.36 -0.17 -0.09 -0.56 -0.66 -0.67 -0.4 1.04 1.1 1.13 -1.2
-1.37 -2.26 -0.2 -0.2 -0.41 0.0 -0.39 -0.72 -0.34 1.09 1.07 1.0 -0.91
-0.7 -2.87 -0.97 -0.55 -0.22 -0.48 -0.44 -0.6 0.03 1.08 1.04 1.16 -0.62
-1.54 -2.37 -0.16 -1.51 -0.1 -0.62 -0.62 -1.02 -0.51 1.15 1.33 1.48 -1.84
-1.07 -3.35 -0.48 -0.64 -0.81 -0.15 -1.32 -1.17 -0.88 1.33 1.4 1.48 -1.88
-0.42 -0.97 -0.33 -0.94 -0.26 0.0 -0.21 -0.47 -0.17 0.79 0.85 0.87 -0.4
-0.32 -1.06 -0.7 -0.87 -0.49 -0.23 -0.39 -0.67 -0.27 1.03 1.13 1.04 -1.04
-1.02 -2.37 -0.17 0.01 0.36 -1.11 -1.12 -1.2 -1.07 1.05 1.02 1.09 0.1
-1.11 -2.78 -1.16 -0.48 -0.48 -0.59 -1.0 -1.15 -0.9 1.31 1.39 1.24 -0.18
-0.8 -2.79 -0.7 -0.73 -0.48 -1.01 -0.73 -0.88 -0.38 1.29 1.31 1.4 -1.48
-1.25 -3.21 0.16 -0.0 0.24 -0.55 -1.09 -1.45 -1.03 0.95 1.14 1.12 -0.21
-1.16 -3.53 -0.62 -0.58 -0.28 -0.75 -0.69 -0.47 -0.11 1.13 1.23 1.22 -0.75
-0.26 -2.48 -0.05 -0.54 -0.54 -0.31 -0.46 -0.55 -0.33 0.9 0.95 1.04 -0.36
-1.35 -1.27 0.29 -0.07 0.13 -0.52 -0.69 -0.76 -0.39 0.85 0.96 0.96 -0.87
-1.31 -2.18 0.05 -0.39 -0.48 0.3 -0.38 -0.75 0.13 0.94 0.88 1.12 -2.02
-0.65 -3.42 -2.72 -1.2 -0.29 -1.13 -0.68 -0.29 -0.18 1.18 1.29 1.19 0.11
-0.63 -2.37 -1.61 -1.37 -0.53 -0.41 -0.34 -0.37 -0.34 1.24 1.18 1.18 -0.42
-0.58 -2.09 -1.04 -0.64 -0.26 -0.52 -0.47 -0.59 -0.12 1.17 1.06 1.19 -0.93
-0.7 -2.83 -0.83 -0.28 -0.01 -0.14 -0.7 -1.13 -0.52 0.93 1.31 1.13 -0.7
-1.06 -3.68 -0.65 -0.44 0.46 -1.14 -1.19 -1.22 -1.15 1.19 1.23 1.3 -0.25
-1.02 -3.98 -0.47 -0.46 -0.29 0.12 -0.33 -0.42 -0.06 1.01 1.16 1.02 -1.71
-0.95 -1.04 0.06 0.07 -0.17 -0.37 -0.54 -0.64 -0.47 0.91 0.9 0.83 -0.58
-0.39 -0.89 -0.12 0.12 0.09 -0.53 -0.43 -0.48 -0.34 0.64 0.77 0.73 -0.4
-0.61 -1.7 -0.18 -0.45 0.07 -0.37 -0.31 -0.4 -0.04 0.79 0.9 0.96 -0.93
-1.02 -2.68 -0.02 0.03 0.24 -0.52 -0.89 -0.93 -0.63 0.76 1.09 0.91 0.08
-0.64 -1.53 -0.36 -0.23 0.25 -0.62 -0.69 -0.85 -0.6 0.98 0.96 0.94 -0.21
-0.39 -2.4 -0.54 -0.36 -0.18 -0.14 -0.33 -0.45 -0.07 0.92 0.94 1.03 -1.1
-0.83 -2.94 -0.29 -0.23 -0.64 -0.04 -0.55 -0.78 -0.34 1.12 1.09 1.17 -1.31
-0.81 -2.04 -0.63 -0.66 -0.55 -0.27 -0.25 -0.0 -0.38 1.11 0.99 1.18 -1.42
-0.47 -1.25 -0.09 -0.31 -0.23 -0.12 -0.38 -0.73 -0.25 0.76 0.97 0.94 -0.83
-1.1 -1.98 -0.29 -0.49 0.03 -0.25 -0.54 -0.72 -0.7 0.97 1.16 1.1 -0.66
-0.31 -1.42 -0.32 -0.52 0.06 -0.15 -0.48 -0.5 -0.2 0.94 0.88 0.92 -1.23
-0.49 -2.18 0.05 0.04 -0.12 -0.04 -0.41 -0.55 -0.35 0.71 0.8 0.83 -0.44
-0.93 -2.71 -0.23 -0.18 -0.45 -0.94 -0.55 -0.5 -0.11 1.06 1.14 1.23 -1.4
-0.86 -1.73 -0.64 -0.56 -0.0 -0.73 -0.43 -0.37 -0.35 1.05 0.99 1.03 -0.28
-0.95 -2.68 -0.5 -0.3 -0.63 -0.33 -0.08 0.15 -0.22 0.9 1.13 0.97 -1.18
-0.84 -4.01 0.01 -0.04 -0.24 0.24 -0.48 -1.43 -0.02 0.94 0.94 1.04 -1.31
-0.31 -1.41 -0.25 -0.3 -0.04 -0.19 -0.37 -0.41 0.05 0.84 0.87 0.88 -1.74
-1.1 -2.9 -0.13 -0.54 -0.63 -0.4 -0.28 -0.48 -0.41 0.97 1.16 1.09 -0.34
-0.8 -1.1 -0.44 -0.61 -0.37 -0.64 -0.68 -0.56 -0.36 1.0 1.08 1.11 -0.33
-1.92 - -0.47 -0.39 0.29 -1.41 -1.6 -1.51 -2.21 1.6 1.43 1.42 -1.53
-0.82 -10.64 -0.53 -0.04 -0.28 -0.66 -0.48 -0.69 -0.66 1.08 1.22 1.18 -0.67
-1.34 -3.61 - -3.86 -4.51 -0.73 -1.04 -0.4 -0.63 1.54 1.64 1.7 -0.62
-1.68 -10.09 -0.51 -0.67 -0.73 -0.67 -1.04 -1.4 -0.98 1.32 1.43 1.48 -0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.