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  5. Ehy_g05653

Ehy_g05653


Description : E3 ubiquitin ligase *(RGLG) & original description: none


Gene families : OG0000455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000455_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g05653
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AT5G63970 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.03 OrthoFinder output from all 47 species
Adi_g042134 RGLG2 E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19043 RGLG2 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15378 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18014 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62084 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26791.t1 Aspi01Gene26791 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0075.g037603 No alias E3 ubiquitin ligase *(RGLG) & original description: CDS=233-1204 0.02 OrthoFinder output from all 47 species
Azfi_s1387.g102495 No alias E3 ubiquitin ligase *(RGLG) & original description: CDS=760-1890 0.03 OrthoFinder output from all 47 species
Cba_g14917 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10242 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01301 RGLG2 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06816 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14325 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029296_P001 Zm00001e029296 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR010734 Copine_C 67 279
No external refs found!