Ehy_g05451 (ERD2B)

Aliases : ERD2B

Description : COPI trafficking K/HDEL-signature cargo receptor & original description: none

Gene families : OG0002105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g05451
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
AT3G25040	ERD2B	endoplasmic reticulum retention defective 2B	0.02	OrthoFinder output from all 47 species
Adi_g083649	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.04	OrthoFinder output from all 47 species
Adi_g110140	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.02	OrthoFinder output from all 47 species
Cba_g03077	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.03	OrthoFinder output from all 47 species
Dac_g01978	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.02	OrthoFinder output from all 47 species
Dde_g50719	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.03	OrthoFinder output from all 47 species
Lfl_g00379	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.04	OrthoFinder output from all 47 species
Ore_g06999	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.03	OrthoFinder output from all 47 species
Ore_g07224	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022588	ERD2B	COPI trafficking K/HDEL-signature cargo receptor &...	0.05	OrthoFinder output from all 47 species
Zm00001e008905_P001	ERD2B, Zm00001e008905	ERD2 COPI trafficking K/HDEL-signature receptor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005048	signal sequence binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006621	protein retention in ER lumen	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0032507	maintenance of protein location in cell	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	None	Extended
MF	GO:0042277	peptide binding	None	Extended
BP	GO:0045185	maintenance of protein location	None	Extended
MF	GO:0046923	ER retention sequence binding	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051651	maintenance of location in cell	None	Extended
BP	GO:0072595	maintenance of protein localization in organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
CC	GO:0097525	spliceosomal snRNP complex	IEP	HCCA
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	HCCA
CC	GO:0120114	Sm-like protein family complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000133	ER_ret_rcpt	28	171

External Links

No external refs found!