Azfi_s1566.g104354 (THO7, AtTHO7)

Aliases : THO7, AtTHO7

Description : component *(THOC7) of mRNP trafficking THO subcomplex & original description: CDS=170-976

Gene families : OG0004772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004772_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s1566.g104354

Target	Alias	Description	ECC score	Gene Family Method	Actions
Aob_g04944	THO7, AtTHO7	component *(THOC7) of mRNP trafficking THO subcomplex &...	0.04	OrthoFinder output from all 47 species
Azfi_s0208.g057950	THO7, AtTHO7	component *(THOC7) of mRNP trafficking THO subcomplex &...	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000347	THO complex	None	Extended
CC	GO:0000445	THO complex part of transcription export complex	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006397	mRNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008501	THOC7/Mft1	53	190

External Links

No external refs found!