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  5. Azfi_s1467.g103475

Azfi_s1467.g103475 (UBP1B)


Aliases : UBP1B

Description : stress granule assembly factor *(UBP1) & original description: CDS=1-843


Gene families : OG0002014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s1467.g103475

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0173.g055821 UBP1B stress granule assembly factor *(UBP1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g03213 UBP1B stress granule assembly factor *(UBP1) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 168 238
IPR000504 RRM_dom 82 147
No external refs found!