Solyc09g018450.3.1 (Solyc09g018450.3)


Aliases : Solyc09g018450.3

Description : 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. ubiquitin-activating enzyme 1 (UBA1)


Gene families : OG_01_0001442 (Gene family) Phylogenetic Tree(s): OG0001442_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g018450.3.1
Cluster HCCA cluster: Cluster_290

Target Alias Description ECC score Gene Family Method Actions
AT2G30110 UBA1, MOS5, ATUBA1 ubiquitin-activating enzyme 1 0.06 Gene family
Cre09.g386400 No alias 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.03 Gene family
GSVIVT01024680001 No alias 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.02 Gene family
MA_10436758g0010 No alias 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.02 Gene family
Zm00001d005085 GRMZM5G800842 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.03 Gene family
Zm00001d052314 GRMZM2G111818 29.5.11.2 protein.degradation.ubiquitin.E1 Encodes a... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000594 ThiF_NAD_FAD-bd 85 460
IPR032420 E1_4HB 330 399
IPR000594 ThiF_NAD_FAD-bd 479 978
IPR019572 UBA_E1_Cys 666 919
IPR032418 E1_FCCH 259 328
IPR018965 Ub-activating_enz_E1_C 990 1079
No external refs found!