Heatmap: Cluster_11 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Internodes of Aerial Stem
Leaf Sheath at Stem Node
Root
1.58 - -
1.48 -4.81 -2.56
1.54 -5.38 -3.88
1.53 -5.27 -3.51
Ehy_g01823 (NLM6)
1.28 -2.52 -1.36
1.57 -7.29 -5.17
1.5 - -2.62
Ehy_g03333 (XTH8)
1.2 -4.03 -0.63
1.31 - -0.95
1.48 -3.75 -2.83
1.55 - -3.85
1.46 -3.07 -2.89
Ehy_g05218 (GRF7)
1.49 -3.47 -3.23
1.58 - -
1.48 -4.55 -2.5
Ehy_g07160 (LAC17)
1.46 - -1.96
1.5 - -2.51
Ehy_g07594 (FUC1)
1.44 -5.25 -1.89
Ehy_g08006 (ROC7)
1.49 - -2.43
Ehy_g08244 (SOS5)
1.57 - -5.48
Ehy_g09514 (HTB4)
1.23 -4.63 -0.7
1.58 - -
1.58 - -
1.58 - -
Ehy_g11229 (ATDAD1)
1.37 - -1.27
1.26 -1.15 -2.73
1.47 - -2.13
1.58 - -
1.36 - -1.22
1.58 - -
1.29 -3.72 -1.08
Ehy_g12518 (SK11)
1.42 -3.85 -2.02
0.99 -1.44 -0.62
1.43 -4.12 -2.0
1.45 -3.21 -2.7
1.46 -3.28 -2.77
1.54 - -3.57
Ehy_g13200 (SAR1)
1.47 -4.62 -2.45
1.25 -1.51 -1.93
1.58 - -
1.53 -5.44 -3.56
1.3 -3.85 -1.11
1.58 - -
1.51 - -2.74
1.28 -4.85 -0.91
1.41 -3.33 -2.05
1.58 - -
Ehy_g15685 (KCS11)
1.46 -5.81 -2.13
1.45 - -1.93
1.4 -4.14 -1.7
Ehy_g16376 (RPL34)
1.35 -1.96 -2.33
Ehy_g16607 (MLP423)
1.58 -10.24 -8.07
1.58 - -
1.43 - -1.68
Ehy_g17438 (KCS4)
1.49 - -2.38
1.25 -3.46 -0.94
1.34 - -1.11
1.47 -4.04 -2.57
1.44 -3.63 -2.26
Ehy_g18124 (PFL)
1.42 -2.29 -3.15
Ehy_g18442 (EMB2296)
1.3 -2.47 -1.51
1.58 - -
1.5 -4.09 -3.24
1.45 - -1.89
1.55 -3.88 -
1.46 -3.74 -2.49
1.44 -3.54 -2.26
1.27 - -0.76
1.58 - -
Ehy_g22239 (CKS1)
1.22 -3.9 -0.72
Ehy_g25285 (RCI1)
1.21 -2.01 -1.17

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.