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  5. Azfi_s0796.g087282

Azfi_s0796.g087282 (LOS1)


Aliases : LOS1

Description : mRNA-translocation factor *(eEF2)) & original description: CDS=251-2782


Gene families : OG0001393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0796.g087282
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_25350V3.1 LOS1, Pp3c11_25350 Ribosomal protein S5/Elongation factor G/III/V family protein 0.01 OrthoFinder output from all 47 species
Pp3c7_1950V3.1 LOS1, Pp3c7_1950 Ribosomal protein S5/Elongation factor G/III/V family protein 0.03 OrthoFinder output from all 47 species
Ppi_g27519 LOS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo411087 LOS1 Protein biosynthesis.translation elongation.eEF2... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004150 dihydroneopterin aldolase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005517 Transl_elong_EFG/EF2_IV 611 722
IPR000795 T_Tr_GTP-bd_dom 18 342
IPR000640 EFG_V-like 724 810
IPR004161 EFTu-like_2 394 467
IPR041095 EFG_II 487 549
No external refs found!