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  5. Azfi_s0658.g081281

Azfi_s0658.g081281 (ABO1, ELO2)


Aliases : ABO1, ELO2

Description : component *(ELP1) of ELONGATOR transcription elongation complex & original description: CDS=1-2196


Gene families : OG0006371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0658.g081281

Target Alias Description ECC score Gene Family Method Actions
Aev_g35033 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.02 OrthoFinder output from all 47 species
LOC_Os07g37640.1 ABO1, ELO2,... component ELP1 of ELONGATOR transcription elongation complex 0.03 OrthoFinder output from all 47 species
Nbi_g04458 ABO1, ELO2 component *(ELP1) of ELONGATOR transcription elongation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0002098 tRNA wobble uridine modification IEA Interproscan
CC GO:0033588 elongator holoenzyme complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
MF GO:0070037 rRNA (pseudouridine) methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR006849 Elp1 185 305
No external refs found!