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  5. Azfi_s0427.g069272

Azfi_s0427.g069272 (RNPS1, SR45)


Aliases : RNPS1, SR45

Description : component *(RNPS1) of RNA quality control Exon Junction complex & original description: CDS=114-1403


Gene families : OG0002814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0427.g069272

Target Alias Description ECC score Gene Family Method Actions
Aop_g10362 RNPS1, SR45 component *(RNPS1) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Cba_g13467 RNPS1, SR45 component *(RNPS1) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Msp_g10775 RNPS1, SR45 component *(RNPS1) of RNA quality control Exon Junction... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0031179 peptide modification IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 111 179
No external refs found!