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  5. Azfi_s0402.g068300

Azfi_s0402.g068300


Description : not classified & original description: CDS=78-2465


Gene families : OG0004892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0402.g068300
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT1G42440 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021357.35 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre16.g673700 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os11g19250.1 LOC_Os11g19250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_74958g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g14950.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo123319 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc04g082330.3.1 Solyc04g082330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e029566_P001 Zm00001e029566 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004819 glutamine-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007034 BMS1_TSR1_C 494 789
IPR012948 AARP2CN 247 323
No external refs found!