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  5. Azfi_s0390.g067676

Azfi_s0390.g067676


Description : component *(uL24m) of large mitoribosomal-subunit proteome & original description: CDS=124-621


Gene families : OG0006883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006883_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0390.g067676

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00198940 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT5G23535 No alias KOW domain-containing protein 0.03 OrthoFinder output from all 47 species
Aob_g05701 No alias component *(uL24m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre07.g330450 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Gb_25179 No alias component mtRPL24 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
LOC_Os11g04370.1 LOC_Os11g04370 component mtRPL24 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os12g04160.1 LOC_Os12g04160 component mtRPL24 of large ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
MA_10134g0010 No alias component mtRPL24 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Mp8g01470.1 No alias component mtRPL24 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Sam_g20994 No alias component *(uL24m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc08g075850.3.1 Solyc08g075850 component mtRPL24 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Zm00001e024081_P001 Zm00001e024081 component mtRPL24 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005824 KOW 17 48
IPR003256 Ribosomal_L24 51 108
No external refs found!