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  5. Azfi_s0353.g066633

Azfi_s0353.g066633


Description : UDP-N-acetylglucosamine O-acyltransferase *(LpxA) & original description: CDS=208-1059


Gene families : OG0008065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0353.g066633
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Len_g22513 No alias UDP-N-acetylglucosamine O-acyltransferase *(LpxA) &... 0.05 OrthoFinder output from all 47 species
Solyc12g008790.3.1 Solyc12g008790 UDP-N-acetylglucosamine O-acyltransferase (LpxA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0034511 U3 snoRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001451 Hexapep 151 185
IPR001451 Hexapep 38 72
IPR029098 Acetyltransf_C 222 268
No external refs found!