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  5. Azfi_s0306.g063951

Azfi_s0306.g063951


Description : nuclear-encoded organellar RNA polymerase *(NEP) & original description: CDS=1-3468


Gene families : OG0002420 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002420_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0306.g063951
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT1G68990 MGP3 male gametophyte defective 3 0.03 OrthoFinder output from all 47 species
Adi_g111210 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Aob_g40349 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.04 OrthoFinder output from all 47 species
Dde_g12005 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Len_g08158 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.04 OrthoFinder output from all 47 species
Msp_g24039 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Ore_g43034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037650_P001 PDE319, SCA3,... nuclear-encoded organellar RNA polymerase (NEP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008915 lipid-A-disaccharide synthase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0043743 LPPG:FO 2-phospho-L-lactate transferase activity IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR029262 RPOL_N 337 664
No external refs found!