Heatmap: Cluster_24 (HCCA)

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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
-0.32 -0.29 -1.58 -3.94 -2.36 0.62 0.52 0.38 0.11 - -10.71 -12.27 2.44
0.61 -0.83 -0.38 -0.09 -0.27 0.01 0.07 -0.0 0.13 -2.01 -2.67 -2.27 1.85
0.06 -2.3 -0.86 -0.12 -0.49 -0.39 -0.17 -0.09 -0.07 -0.84 -0.76 -0.91 2.12
0.21 -4.32 -0.32 0.16 -0.13 -0.38 -0.15 -0.2 -0.45 -0.03 -0.1 -0.14 1.52
0.77 -0.76 -1.99 -2.32 -2.35 0.34 0.16 0.91 0.31 -3.47 -4.45 -4.22 2.13
-0.08 -2.3 -0.98 -0.56 -0.81 -0.28 0.1 0.03 0.22 -1.88 -1.81 -1.49 2.35
0.46 -2.43 -0.44 0.11 0.0 0.19 -0.19 0.05 -0.59 -0.8 -1.33 -0.53 1.7
-0.05 -2.78 -0.68 -0.55 -0.72 0.42 0.11 0.19 0.24 -2.61 -3.05 -2.81 2.26
0.27 -2.9 -4.74 - - 0.42 0.22 0.38 0.04 -1.74 -1.71 -0.92 2.5
0.46 -3.18 -0.75 -1.14 -0.88 -0.08 0.18 0.17 0.25 -0.3 -0.28 -0.2 1.59
0.63 -0.63 -0.32 -0.25 -0.07 -0.09 0.09 0.29 0.24 -0.54 -0.76 -0.55 0.88
-0.14 -0.57 -1.69 -1.51 -2.97 -0.51 -0.11 -0.49 -0.07 -0.69 -1.2 -0.76 2.51
-0.03 -4.27 -1.12 -0.49 -0.87 -0.28 0.42 0.49 0.47 -1.98 -1.77 -2.35 2.19
0.23 -0.11 -1.8 -2.82 -2.26 0.11 0.68 0.87 1.08 -4.14 -4.6 -3.67 1.79
-0.26 -2.53 -2.31 -1.66 -1.76 -0.16 0.07 0.15 0.41 -1.04 -1.2 -0.92 2.42
-0.33 0.3 -0.01 -3.41 -0.46 0.88 0.26 -0.3 -0.23 -5.87 - - 2.15
0.53 -0.39 - -2.69 -2.41 0.4 -0.21 -0.66 0.85 -1.07 -1.81 -0.89 2.18
0.86 -1.49 0.09 -0.79 -0.25 0.05 0.16 0.39 0.08 -1.47 -1.54 -1.45 1.46
0.8 -3.17 0.02 -1.16 -0.65 0.27 0.22 0.28 0.22 -2.1 -2.5 -2.4 1.89
0.1 -1.97 -0.13 0.12 -0.17 0.54 0.29 0.3 -0.05 -6.05 -5.47 -3.76 1.92
-0.09 -1.32 -1.28 -1.21 -1.03 0.35 0.35 0.12 0.71 -1.17 -1.16 -1.01 1.88
0.16 -1.38 -0.55 -0.18 -0.11 -0.38 -0.58 -0.73 -0.73 -0.88 -0.91 -0.98 2.26
-0.1 -1.7 -0.9 -1.04 -0.87 -0.01 0.11 0.12 0.11 -2.26 -2.28 -2.25 2.41
0.98 -2.08 -0.03 -0.64 -0.3 0.18 0.26 0.34 0.32 -1.32 -1.35 -1.27 1.21
0.33 -2.95 -0.31 -1.31 0.68 -0.18 -0.48 -0.79 -0.92 -0.39 -0.46 -0.51 1.97
1.0 -0.69 - - -2.45 -0.59 -0.92 -0.85 -2.29 - - - 3.04
0.79 -1.04 0.19 -0.03 0.1 -0.04 -0.01 0.03 0.2 -1.0 -1.25 -1.1 1.04
0.81 -7.26 0.18 -0.08 -0.21 -0.2 0.18 0.25 0.29 -1.67 -1.84 -1.97 1.6
0.29 -1.88 -0.31 0.34 -0.38 0.5 -0.17 -0.3 -0.24 -0.72 -0.75 -0.63 1.52
0.62 -1.32 -0.04 -0.46 0.02 0.08 0.11 0.2 0.61 -1.33 -1.39 -1.43 1.25
0.16 -0.63 -0.41 0.14 -0.05 -0.03 0.1 0.14 0.18 -0.88 -1.02 -0.91 1.36
0.43 -0.3 -0.14 -0.51 0.05 -0.3 -0.27 -0.13 -0.09 -0.27 -0.29 -0.34 1.17
-0.19 -0.69 -1.28 -1.29 -1.5 0.22 0.43 0.46 0.48 -2.63 -2.27 -2.61 2.17
-0.2 -1.93 -2.34 -2.21 -1.85 -0.58 -0.77 -0.68 0.2 -1.73 -0.56 -0.97 2.74
0.41 -1.1 -1.13 -1.69 -1.34 0.76 0.26 0.08 -0.03 - -10.27 -10.25 2.35
0.47 -2.29 -0.69 -0.42 -0.91 0.14 0.15 0.28 0.32 -1.06 -0.92 -1.04 1.74
0.59 -2.13 -0.69 -1.27 -1.06 0.18 0.37 0.37 0.6 -1.21 -1.25 -1.07 1.67
-0.21 -2.18 -1.2 -0.12 -0.7 0.11 0.01 0.05 0.33 -0.77 -1.28 -0.96 2.02
-0.33 -1.15 -1.43 -0.77 -0.85 0.06 0.27 0.25 0.58 -0.11 -0.29 -0.17 1.42
0.8 -1.74 -5.89 - -7.0 -2.1 -0.56 -1.36 -0.93 -3.85 -3.08 -3.12 3.14
0.55 -2.45 0.19 -0.78 -0.12 0.68 -0.05 -0.28 -0.16 -1.64 -1.9 -1.83 1.82
0.09 -3.32 -0.72 -1.18 -0.72 0.39 0.28 0.25 0.61 -0.41 -0.49 -0.45 1.46
0.4 -1.43 -0.83 0.35 0.09 0.08 -0.1 -0.08 0.29 -1.58 -1.21 -1.29 1.61
-0.21 -3.11 -1.36 -1.07 -1.05 0.1 0.09 0.18 0.4 -0.26 -0.21 -0.13 1.8
0.12 -3.29 -1.4 -1.45 -1.7 0.07 -0.1 0.03 0.16 -1.87 -2.02 -2.03 2.55
0.15 -3.43 -1.07 -0.8 -1.08 0.35 0.48 0.39 0.85 -2.3 -2.69 -2.13 1.97
0.79 -1.92 -0.59 -0.93 -0.99 0.0 0.26 0.34 0.57 -0.99 -0.89 -0.85 1.46
0.07 -0.42 -0.84 -0.28 -0.44 0.09 0.1 0.29 0.44 -0.53 -0.54 -0.5 1.19
0.68 0.05 - -3.69 -7.14 0.86 0.55 0.2 0.19 - - - 2.24
0.11 -3.85 -0.43 -1.19 -0.75 -0.25 -0.07 0.09 0.01 -2.79 -2.82 -2.78 2.53
-0.03 -2.92 -0.93 -0.07 -0.59 0.23 0.03 -0.04 0.18 -0.01 -0.15 -0.18 1.42
0.87 -1.58 0.07 -1.22 -0.79 0.03 0.17 0.45 0.33 -0.55 -0.66 -0.71 1.06
0.68 -0.62 -0.19 -0.61 -0.26 -0.16 0.04 0.04 0.23 -0.48 -0.55 -0.51 1.1
1.06 -3.88 -2.83 -3.34 -2.73 -0.12 -0.05 0.19 -0.35 -2.12 -2.25 -2.46 2.59
0.79 -1.38 0.06 -0.8 -0.24 0.53 0.44 0.3 0.3 -1.39 -1.35 -1.4 1.01
0.35 -2.82 -0.25 0.26 0.01 -0.28 -0.34 -0.22 -0.12 -0.33 -0.46 -0.23 1.47
0.81 -2.3 0.07 -0.45 -0.55 0.24 0.43 0.39 0.53 -1.57 -1.65 -1.64 1.21
-0.43 -2.23 -1.58 -1.17 -1.09 0.04 -0.07 -0.07 -0.13 -1.34 -1.33 -1.23 2.52
0.17 -1.34 -0.65 -0.39 -0.34 -0.04 -0.36 -0.47 0.53 -1.21 -1.39 -1.13 2.04
0.04 -3.27 -1.15 -1.79 -0.9 -1.84 -0.54 0.38 0.15 -4.88 - -4.81 2.84
0.94 -2.7 -0.4 -0.34 -0.41 0.08 0.47 0.45 0.53 -1.83 -1.89 -1.91 1.35
0.74 0.48 -0.02 -0.96 -0.35 0.07 -0.08 -0.2 0.1 -2.95 -2.88 -3.06 1.73
0.52 -2.72 -0.76 -0.85 -0.69 -0.5 0.03 0.04 0.45 -0.28 -0.21 -0.21 1.57
0.23 -1.06 -0.67 -0.08 -0.06 -0.05 -0.24 -0.28 -0.13 -0.41 -0.42 -0.27 1.55
0.79 -1.08 0.46 -1.47 -0.31 0.52 0.46 0.52 0.18 -3.97 -3.98 -4.02 1.43
0.71 -1.19 -1.12 0.27 -0.35 -0.19 0.24 0.43 -0.08 -2.56 -2.98 -2.29 1.86
0.66 -1.54 -0.3 -0.04 -0.14 0.06 -0.13 -0.16 0.03 -1.27 -1.59 -1.38 1.76
0.23 -0.92 -0.58 0.54 0.23 -0.2 -0.18 0.02 -0.06 -0.57 -0.7 -0.82 1.27
0.19 -0.86 0.06 -0.95 -0.45 -0.28 -0.35 -0.16 -0.38 -2.33 -2.15 -2.28 2.35
0.43 -1.11 -0.88 -2.5 -1.11 0.37 -1.06 -2.03 -2.07 -3.19 -3.46 -3.8 2.9
0.36 -1.64 0.19 -0.17 -0.11 -0.32 0.07 0.33 -0.11 -2.35 -2.42 -2.51 1.94
0.06 -1.46 -0.93 -1.3 -1.36 0.39 0.23 0.14 0.13 -1.71 -1.46 -1.64 2.2
-0.04 -2.41 -1.03 -1.17 -0.43 0.29 0.29 0.19 -0.06 -0.37 -0.68 -0.46 1.81
-0.42 - -1.01 -0.05 -0.83 -0.19 -0.24 -0.18 -0.49 -3.52 -3.97 -2.53 2.72
0.4 -1.4 -0.63 -0.88 -0.93 -0.19 -0.06 0.14 0.23 -1.24 -1.44 -1.43 2.11
0.26 -0.83 -1.08 -0.65 -0.77 0.86 0.55 0.29 -0.13 -3.18 -2.85 -3.28 1.92
0.83 -3.61 0.69 -0.07 0.26 -0.12 -0.08 0.13 -0.0 -2.01 -2.17 -2.22 1.45
-0.04 -0.69 -0.54 -0.98 -0.68 0.3 0.05 -0.19 0.37 -0.2 -0.24 -0.09 1.32
0.39 -2.26 -1.01 -1.39 -1.45 0.32 0.46 0.58 0.39 -3.78 -3.96 -4.03 2.21
-0.24 -2.69 -0.82 -0.71 -0.61 0.25 0.09 0.12 0.18 -0.59 -0.43 -0.39 1.82
0.21 -1.86 -0.67 -0.05 0.29 -0.36 -0.19 -0.23 -0.11 -0.43 -0.56 -0.51 1.68
0.22 -3.48 0.03 -1.47 -0.69 -0.92 -0.61 -0.47 -0.9 -3.22 -3.09 -3.33 2.8
0.99 - - - - -0.33 -0.51 -0.42 0.58 - - - 2.86
0.27 -2.2 -0.27 -0.69 -0.51 0.07 -0.04 -0.11 0.14 -1.01 -0.98 -0.92 1.94
-0.18 -2.32 -1.29 -0.33 -0.58 0.13 0.12 -0.03 0.29 0.23 -0.07 0.2 1.25
0.35 -3.23 -0.43 -1.87 -1.15 -0.2 -0.27 -0.17 -0.19 -2.77 -2.86 -2.82 2.64
0.32 -4.14 -0.07 -0.02 -0.24 -0.08 -0.06 0.16 -0.17 -5.3 -4.86 -5.29 2.29
-0.57 -2.8 -1.56 -1.67 -1.81 0.23 0.13 0.1 0.53 -1.85 -1.76 -1.83 2.49
0.6 -2.17 -1.09 -1.88 -1.45 -0.05 0.11 0.17 0.28 -2.59 -2.78 -2.79 2.41
0.35 0.18 -1.01 -1.74 -1.63 0.43 0.4 0.18 0.34 -1.98 -1.84 -1.95 1.86
0.35 -1.3 -0.99 -1.5 -2.17 0.75 0.64 0.44 0.53 -1.05 -1.08 -0.87 1.43
0.69 -1.86 -0.75 -1.0 -0.84 -0.4 -0.12 0.04 -0.02 -2.66 -2.8 -2.65 2.41
0.63 -1.23 -0.49 -0.26 -0.27 -0.01 0.15 0.0 0.43 -0.95 -1.2 -1.24 1.5
0.46 -1.87 - - -5.61 -0.84 0.23 -0.3 0.63 -0.17 0.12 0.02 2.09
0.59 -0.79 -1.76 -3.56 - -0.48 -0.92 -1.01 -0.07 - - - 2.97
0.78 -1.46 -0.33 -1.25 -0.08 0.47 0.46 0.53 0.49 -1.66 -1.94 -1.63 1.16
0.4 -0.06 -7.13 -8.07 -8.08 0.05 0.68 1.09 0.26 -4.23 -3.79 -4.37 2.2
0.75 -1.7 0.62 -0.54 0.21 0.39 0.25 0.31 0.21 -2.55 -2.76 -2.88 1.18
0.48 -2.25 0.17 -0.08 0.06 -0.19 0.04 0.12 -0.21 -1.32 -1.46 -1.45 1.72
0.13 -0.57 -0.88 -0.73 -0.75 -0.0 0.05 0.11 0.3 -0.02 -0.24 -0.15 1.27
0.64 -1.95 -0.99 -1.68 -1.36 0.14 0.08 0.55 0.66 -2.97 -4.32 - 2.2
0.14 -0.64 -0.98 -0.24 -1.03 -0.79 0.69 0.99 -0.28 -4.53 -4.25 -5.86 2.1
0.43 -4.63 -0.06 0.3 0.24 -0.56 -0.42 -0.45 -0.43 -0.39 -0.47 -0.54 1.67
-0.29 -2.01 -0.43 -0.28 -0.33 -0.38 -0.37 -0.43 -0.24 -1.07 -1.34 -0.97 2.34
0.1 -1.29 -1.07 -0.36 -0.66 0.11 -0.04 0.09 0.65 -0.66 -0.84 -0.67 1.65
0.23 -0.27 -1.15 -0.99 -0.83 0.46 0.62 0.52 1.02 -3.25 -3.69 -3.63 1.51
-0.16 -2.96 -0.9 -0.6 -0.52 0.1 0.09 -0.24 0.15 0.15 0.05 0.2 1.43
0.23 -1.26 -0.71 -0.55 -0.52 -0.49 -0.46 -0.44 -0.42 -1.02 -0.94 -0.91 2.31
-0.29 -3.19 -1.37 -1.0 -1.39 -0.45 0.14 0.41 0.71 -1.8 -2.09 -1.75 2.37
0.99 -1.09 -0.04 -0.04 -0.23 0.14 0.22 0.13 0.01 -1.3 -1.48 -1.41 1.16
0.18 -0.54 -1.25 -2.2 -0.7 0.51 0.23 -0.06 0.34 -1.9 -2.78 -2.01 2.15
-0.05 -3.04 -0.28 -0.7 -0.54 -0.13 -0.06 0.03 0.08 -1.08 -1.06 -1.13 2.14
0.49 -1.77 0.17 -0.24 0.1 -0.06 0.19 0.37 0.38 -1.72 -2.07 -1.92 1.46
0.21 -3.23 -2.5 -1.98 -1.39 -0.22 -0.34 -0.07 -0.07 -1.94 -2.26 -2.41 2.75
0.61 -3.07 -0.35 -0.91 -0.48 -0.05 -0.29 -0.29 0.04 -0.99 -1.04 -0.92 2.06
0.38 -1.45 -2.66 -1.93 -1.5 0.44 0.33 0.3 0.32 -0.38 -0.48 -0.35 1.68
0.23 -2.07 -1.07 -0.47 -0.72 -0.54 -0.24 -0.44 -0.13 -2.37 -2.28 -2.12 2.58
0.41 0.15 -1.6 -0.52 -0.42 0.18 0.16 -0.2 0.03 -0.96 -1.0 -0.77 1.6
0.46 0.14 - - - 0.95 0.74 0.37 0.52 -3.38 -3.11 -3.21 1.95

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.