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  5. Azfi_s0264.g060926

Azfi_s0264.g060926


Description : not classified & original description: CDS=282-3104


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0264.g060926

Target Alias Description ECC score Gene Family Method Actions
Adi_g074232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086897 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g088948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g51140.1 LOC_Os02g51140 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g37597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g21920.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.4) 0.04 OrthoFinder output from all 47 species
Zm00001e023900_P003 Zm00001e023900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e030859_P001 Zm00001e030859 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 37 168
IPR002934 Polymerase_NTP_transf_dom 546 580
No external refs found!