Description : not classified & original description: CDS=211-1146
Gene families : OG0002165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002165_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Azfi_s0245.g060013 | |
Cluster | HCCA: Cluster_54 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G27840 | HDA13, HDT04, HDT4 | histone deacetylase-related / HD-related | 0.03 | OrthoFinder output from all 47 species | |
AT3G44750 | HDA3, ATHD2A, HDT1, HD2A | histone deacetylase 3 | 0.06 | OrthoFinder output from all 47 species | |
Adi_g045241 | HDT3, HD2C | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g082789 | No alias | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g106676 | HDT3, HD2C | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g12332 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g15503 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ceric.33G031600.1 | HDA3, ATHD2A,... | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.06 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000388.65 | ATFKBP53, FKBP53 | Protein modification.protein folding and quality... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000983.33 | No alias | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g11095 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g03373 | HDA3, ATHD2A, HDT1, HD2A | peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g20489 | HDA3, ATHD2A, HDT1, HD2A | peptidyl-prolyl cis-trans isomerase *(FKBP43/53) &... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01031404001 | HDA3, ATHD2A, HDT1, HD2A | Chromatin organisation.histone modifications.histone... | 0.13 | OrthoFinder output from all 47 species | |
LOC_Os05g51830.1 | HDT3, HD2C,... | histone deacetylase (HDT/HD2) | 0.04 | OrthoFinder output from all 47 species | |
Len_g17092 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.05 | OrthoFinder output from all 47 species | |
MA_118767g0010 | HDA3, ATHD2A, HDT1, HD2A | histone deacetylase (HDT/HD2) | 0.04 | OrthoFinder output from all 47 species | |
MA_3905g0010 | No alias | histone deacetylase (HDT/HD2) | 0.02 | OrthoFinder output from all 47 species | |
MA_3905g0020 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
MA_601245g0010 | No alias | histone deacetylase (HDT/HD2) | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g12444 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g07356 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14662 | No alias | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.02 | OrthoFinder output from all 47 species | |
Smo428242 | No alias | Chromatin organisation.histone modifications.histone... | 0.05 | OrthoFinder output from all 47 species | |
Solyc09g009030.4.1 | HDA3, ATHD2A,... | histone deacetylase (HDT/HD2) | 0.07 | OrthoFinder output from all 47 species | |
Solyc11g066840.3.1 | HD2, HDA4, HD2B,... | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Spa_g40541 | HDT3, HD2C | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.09 | OrthoFinder output from all 47 species | |
Tin_g14352 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Tin_g20431 | HDA3, ATHD2A, HDT1, HD2A | HD2-type histone deacetylase *(HD2/HDT) & original... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e032246_P002 | HDA3, ATHD2A,... | histone deacetylase (HDT/HD2) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006839 | mitochondrial transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0030150 | protein import into mitochondrial matrix | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0065002 | intracellular protein transmembrane transport | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0070585 | protein localization to mitochondrion | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071806 | protein transmembrane transport | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | HCCA |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
BP | GO:1990542 | mitochondrial transmembrane transport | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |