Azfi_s0245.g059945 (CSTF64)


Aliases : CSTF64

Description : component *(CstF64/Rna15) of Cleavage Stimulatory Factor (CstF) complex & original description: CDS=364-2109


Gene families : OG0001642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001642_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0245.g059945

Target Alias Description ECC score Gene Family Method Actions
Aob_g19130 CSTF64 component *(ESP1) of Cleavage Stimulatory Factor (CstF)... 0.04 OrthoFinder output from all 47 species
Cre01.g024200 CSTF64 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.02 OrthoFinder output from all 47 species
GSVIVT01013670001 CSTF64 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.02 OrthoFinder output from all 47 species
Gb_06606 ESP1 component ESP1 of Cleavage Stimulatory Factor (CstF) complex 0.03 OrthoFinder output from all 47 species
Gb_13366 ESP1 component ESP1 of Cleavage Stimulatory Factor (CstF) complex 0.03 OrthoFinder output from all 47 species
LOC_Os11g07490.1 CSTF64, LOC_Os11g07490 component CstF64/Rna15 of Cleavage Stimulatory Factor... 0.03 OrthoFinder output from all 47 species
MA_8861g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g069160.3.1 CSTF64, Solyc02g069160 component CstF64/Rna15 of Cleavage Stimulatory Factor... 0.03 OrthoFinder output from all 47 species
Solyc03g119460.4.1 ESP1, Solyc03g119460 component ESP1 of Cleavage Stimulatory Factor (CstF) complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0031124 mRNA 3'-end processing IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 41
IPR000504 RRM_dom 89 150
IPR025742 CSTF2_hinge 231 290
IPR026896 CSTF_C 542 575
No external refs found!