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  5. Azfi_s0245.g059940

Azfi_s0245.g059940


Description : not classified & original description: CDS=732-1343


Gene families : OG0002496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002496_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0245.g059940
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT4G23470 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
Adi_g014574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G076500.1 Ceric.24G076500 not classified & original description: pacid=50628795... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39100.1 LOC_Os10g39100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp3g01780.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g056210.3.1 Solyc12g056210 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e038091_P001 Zm00001e038091 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039043_P006 Zm00001e039043 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!