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  5. Azfi_s0242.g059806

Azfi_s0242.g059806


Description : component *(uL3c) of large plastid ribosomal-subunit proteome & original description: CDS=1-738


Gene families : OG0005291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0242.g059806

Target Alias Description ECC score Gene Family Method Actions
AT2G43030 No alias Ribosomal protein L3 family protein 0.04 OrthoFinder output from all 47 species
Adi_g022051 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Adi_g022052 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ala_g05869 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Als_g10884 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aob_g03365 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aop_g26780 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ceric.08G072800.1 Ceric.08G072800 component *(uL3c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cre48.g761197 No alias Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Dcu_g02623 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ehy_g00510 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01019355001 No alias 50S ribosomal protein L3, chloroplastic OS=Spinacia oleracea 0.07 OrthoFinder output from all 47 species
Gb_26251 No alias component psRPL3 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
LOC_Os02g04460.1 LOC_Os02g04460 component psRPL3 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Len_g00379 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Lfl_g10299 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
MA_10432831g0010 No alias component psRPL3 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Mp1g03320.1 No alias component psRPL3 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Nbi_g00713 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pp3c16_1020V3.1 Pp3c16_1020 Ribosomal protein L3 family protein 0.05 OrthoFinder output from all 47 species
Pp3c6_28830V3.1 Pp3c6_28830 Ribosomal protein L3 family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015211 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Sam_g11021 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Sam_g24523 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Smo430901 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Solyc06g051200.3.1 Solyc06g051200 component psRPL3 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Spa_g05012 No alias component *(uL3c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!