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  5. Ehy_g04389

Ehy_g04389


Description : component *(uL5c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0007287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g04389
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00259120 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT4G01310 No alias Ribosomal L5P family protein 0.06 OrthoFinder output from all 47 species
Adi_g040703 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aev_g08868 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ala_g07051 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Als_g00607 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aob_g01084 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Aop_g10101 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Azfi_s0114.g046128 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cba_g03728 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.16G001900.1 Ceric.16G001900 component *(uL5c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dac_g11621 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g18361 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g06048 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01027006001 No alias Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
LOC_Os03g03360.1 LOC_Os03g03360 component psRPL5 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Len_g49952 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g01005 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
MA_8012412g0010 No alias 50S ribosomal protein L5, chloroplastic OS=Spinacia... 0.09 OrthoFinder output from all 47 species
MA_86404g0010 No alias 50S ribosomal protein L5, chloroplastic OS=Spinacia... 0.03 OrthoFinder output from all 47 species
Mp1g19970.1 No alias component psRPL5 of large ribosomal subunit proteome 0.09 OrthoFinder output from all 47 species
Msp_g12267 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Nbi_g00386 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ore_g17964 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pir_g10124 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pnu_g31745 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pp3c1_25850V3.1 Pp3c1_25850 Ribosomal L5P family protein 0.03 OrthoFinder output from all 47 species
Pp3c2_17110V3.1 Pp3c2_17110 Ribosomal L5P family protein 0.03 OrthoFinder output from all 47 species
Ppi_g03610 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021655 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Smo6364 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Solyc09g007560.4.1 Solyc09g007560 component psRPL5 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Spa_g04808 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g10891 No alias component *(uL5c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e000182_P001 Zm00001e000182 component psRPL5 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR031309 Ribosomal_L5_C 156 249
IPR031310 Ribosomal_L5_N 96 152
No external refs found!