Heatmap: Cluster_5 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

(DEF2)

Gene	Internodes of Aerial Stem	Leaf Sheath at Stem Node	Root
Ehy_g00185	-0.48	1.17	-5.1
Ehy_g00304	-0.42	1.15	-4.87
Ehy_g00339	-0.48	1.18	-5.36
Ehy_g00383 (CLPP6)	-0.32	0.88	-1.45
Ehy_g00469 (GDC1)	-0.22	0.9	-1.83
Ehy_g00510	-0.39	1.02	-2.26
Ehy_g00548	-0.16	0.84	-1.7
Ehy_g00568	-0.22	0.92	-2.0
Ehy_g00609	-0.08	0.66	-1.09
Ehy_g00627 (PSBW)	-0.26	1.11	-6.52
Ehy_g00714	-0.26	0.89	-1.71
Ehy_g00724 (EMB2759)	-0.08	0.7	-1.24
Ehy_g00812 (CA4)	-0.72	1.26	-11.39
Ehy_g00848	-0.78	1.26	-5.89
Ehy_g00919	-0.48	1.17	-4.66
Ehy_g00942	-0.62	1.04	-1.76
Ehy_g00951 (NAP7)	-0.4	0.82	-1.08
Ehy_g00976 (GR2)	-0.33	0.99	-2.17
Ehy_g00983	-0.43	1.08	-2.84
Ehy_g01032	-0.45	1.12	-3.37
Ehy_g01065 (DEG8)	-0.18	0.98	-2.72
Ehy_g01176 (CRB)	-0.33	1.12	-5.41
Ehy_g01271 (SRS)	-0.29	0.73	-0.94
Ehy_g01290	-0.3	1.05	-3.16
Ehy_g01313	-0.32	0.81	-1.18
Ehy_g01340 (RPS1)	-0.21	0.98	-2.68
Ehy_g01360 (TROL)	-0.22	0.68	-0.91
Ehy_g01371 (FNR1)	-0.3	1.13	-8.25
Ehy_g01449	-0.37	1.02	-2.38
Ehy_g01470 (ATPD)	-0.41	1.09	-3.09
Ehy_g01944	-0.24	0.73	-1.02
Ehy_g01982 (PSB28)	-0.32	1.12	-5.81
Ehy_g01998	-0.4	1.13	-4.15
Ehy_g02038 (ATF1)	-0.64	1.21	-4.48
Ehy_g02069	-0.24	0.81	-1.32
Ehy_g02199	-0.42	0.98	-1.84
Ehy_g02216 (RPL4)	-0.24	0.85	-1.5
Ehy_g02229	-0.23	0.97	-2.42
Ehy_g02495 (ACS1)	-0.3	0.81	-1.19
Ehy_g02574	-0.62	1.2	-4.12
Ehy_g02635	-0.36	0.65	-0.63
Ehy_g02656	-0.46	0.97	-1.7
Ehy_g02694	-0.33	1.02	-2.47
Ehy_g02881 (HDS)	-0.28	0.95	-2.05
Ehy_g02934 (emb2746)	-0.44	0.97	-1.72
Ehy_g02939 (FZL)	-0.48	1.14	-3.68
Ehy_g03089	-0.3	1.03	-2.77
Ehy_g03148	-0.28	0.89	-1.64
Ehy_g03162	-0.33	1.01	-2.44
Ehy_g03169	-0.38	1.03	-2.33
Ehy_g03244	-0.24	0.97	-2.39
Ehy_g03261	-0.49	1.12	-3.1
Ehy_g03355	-0.29	0.85	-1.41
Ehy_g03714 (GSA1)	-0.47	1.09	-2.74
Ehy_g03750	-0.48	1.17	-4.81
Ehy_g03761	-0.32	0.65	-0.67
Ehy_g03902 (NAP8)	-0.41	1.03	-2.29
Ehy_g03938 (FTSH8)	-0.4	1.08	-2.99
Ehy_g04039 (PREP1)	-0.58	0.91	-1.14
Ehy_g04204 (RBCS1A)	-0.47	1.19	-10.08
Ehy_g04285 (FTRA1)	-0.26	0.87	-1.59
Ehy_g04288	-0.39	0.88	-1.32
Ehy_g04373	-0.44	1.04	-2.32
Ehy_g04389	-0.33	1.0	-2.26
Ehy_g04407	-0.38	1.03	-2.43
Ehy_g04536 (CHLM)	-0.17	0.97	-2.68
Ehy_g04542	-0.39	1.14	-5.2
Ehy_g04571	-0.28	0.92	-1.79
Ehy_g04581	-0.37	1.04	-2.55
Ehy_g04604 (CH42)	-0.23	0.85	-1.53
Ehy_g04622 (STN8)	-0.47	1.04	-2.21
Ehy_g04647	-0.46	0.95	-1.56
Ehy_g04798	-0.2	0.9	-1.93
Ehy_g04838 (HCF107)	-0.27	0.71	-0.9
Ehy_g04897	-0.2	0.84	-1.56
Ehy_g04940 (RIF1)	-0.26	0.73	-0.96
Ehy_g05250 (WCRKC2)	-0.64	1.22	-5.14
Ehy_g05286	-0.34	1.07	-3.21
Ehy_g05353 (PSAL)	-0.24	1.1	-7.67
Ehy_g05444	-0.4	1.06	-2.71
Ehy_g05450	-0.31	0.92	-1.74
Ehy_g05564 (emb2726)	-0.31	0.96	-2.01
Ehy_g05627 (ZKT)	-0.46	1.06	-2.37
Ehy_g05633 (FNR1)	-0.25	1.05	-3.51
Ehy_g05686 (ATPC1)	-0.33	1.13	-6.68
Ehy_g05743	-0.59	1.16	-3.28
Ehy_g05744	-0.27	0.91	-1.77
Ehy_g05746 (ACSF)	-0.3	1.07	-3.66
Ehy_g05756 (CDSP32)	-0.43	1.13	-3.73
Ehy_g05865	-0.41	0.81	-1.01
Ehy_g06140 (HMA1)	-0.21	0.54	-0.57
Ehy_g06718 (CSP41A)	-0.37	1.15	-7.61
Ehy_g06777	-0.83	1.18	-2.49
Ehy_g06812 (GLR3.3)	-0.51	1.13	-3.12
Ehy_g06850	-0.67	1.24	-5.82
Ehy_g06869 (HCF101)	-0.21	1.0	-2.89
Ehy_g07429 (PTAC4)	-0.25	0.94	-2.02
Ehy_g07556 (GAPA-2)	-0.37	1.15	-11.05
Ehy_g07588 (TIM)	-0.6	1.2	-4.7
Ehy_g07609	-0.34	1.09	-3.62
Ehy_g07674 (PTC52)	-0.42	1.15	-4.71
Ehy_g07683	-0.22	0.71	-0.98
Ehy_g07785	-0.69	1.25	-7.64
Ehy_g07894	-0.39	1.07	-2.94
Ehy_g07939 (PPK1)	-0.46	0.85	-1.1
Ehy_g08153 (ATHM2)	-0.23	0.88	-1.73
Ehy_g08451 (SLP)	-0.51	1.19	-5.59
Ehy_g08598 (ANTR1)	-0.53	1.2	-7.01
Ehy_g08821 (OHP2)	-0.29	0.95	-2.01
Ehy_g08912	-0.23	0.89	-1.75
Ehy_g08919	-0.18	0.63	-0.82
Ehy_g08941 (CPN21)	-0.05	0.69	-1.25
Ehy_g09048 (UGT85A7)	-0.45	1.17	-5.55
Ehy_g09545 (SAMDC)	-0.54	1.16	-3.76
Ehy_g09689	-0.51	0.89	-1.18
Ehy_g09915 (TROL)	-0.31	1.09	-4.06
Ehy_g09917 (FTSH1)	-0.64	1.23	-6.21
Ehy_g09947	-0.66	1.24	-7.53
Ehy_g10014	-0.26	1.0	-2.59

-0.41	0.8	-0.97
Ehy_g10104 (PGR1)	-0.36	1.14	-5.46
Ehy_g10313	-0.45	1.1	-3.0
Ehy_g10337 (MRL1)	-0.21	0.8	-1.37
Ehy_g10425 (PETE1)	-0.24	0.69	-0.89
Ehy_g10561	-0.38	1.01	-2.21
Ehy_g10598	-0.19	1.08	-6.17
Ehy_g10716	-0.18	0.62	-0.78
Ehy_g10854	-0.21	0.82	-1.42
Ehy_g10884	-0.21	0.82	-1.44
Ehy_g10969	-0.6	1.13	-2.75
Ehy_g11309 (SCY1)	-0.26	0.93	-1.92
Ehy_g11675 (RFC3)	-0.39	0.92	-1.55
Ehy_g11915	-0.47	0.97	-1.65
Ehy_g11976 (NTRC)	-0.52	0.88	-1.13
Ehy_g12096	-0.37	0.98	-1.97
Ehy_g12595 (PHR2)	-0.33	0.97	-2.0
Ehy_g12940	-0.23	0.8	-1.3
Ehy_g13159	-0.29	1.07	-3.57
Ehy_g13499	-0.21	0.84	-1.54
Ehy_g13798	-0.19	0.68	-0.93
Ehy_g14020	-0.26	0.95	-2.07
Ehy_g14109 (GCP1)	-0.41	0.91	-1.44
Ehy_g14118 (SIGF)	-0.15	0.92	-2.21
Ehy_g14377 (PTAC6)	-0.44	0.8	-0.95
Ehy_g14865 (MCT)	-0.22	0.81	-1.36
Ehy_g15050	-0.28	1.06	-3.44
Ehy_g15453 (PNP)	-0.25	0.78	-1.15
Ehy_g15712	-0.38	1.13	-4.47
Ehy_g15832	-0.23	0.94	-2.18
Ehy_g15841 (SBPASE)	-0.3	1.13	-11.05
Ehy_g15961	-0.3	0.96	-2.02
Ehy_g16035 (GH3.17)	-0.82	1.26	-4.44
Ehy_g17158	-0.59	1.16	-3.35
Ehy_g17711 (PAM68)	-0.21	0.74	-1.1
Ehy_g17993	-0.33	0.87	-1.39
Ehy_g18053 (SUFS)	-0.32	0.86	-1.37
Ehy_g18743 (EMB2761)	-0.3	0.84	-1.34
Ehy_g18921 (ALS)	-0.27	0.55	-0.49
Ehy_g19153	-0.27	1.02	-2.88
Ehy_g19243 (CPSAR1)	-0.35	0.69	-0.73
Ehy_g19254 (CXIP2)	-0.08	0.51	-0.67
Ehy_g19299 (GAPB)	-0.65	1.24	-11.96
Ehy_g19716 (emb1417)	-0.2	0.84	-1.59
Ehy_g20328	-0.06	0.72	-1.34
Ehy_g20509 (HCF136)	-0.36	0.99	-2.11
Ehy_g20788 (ZHD4)	-0.14	0.61	-0.82
Ehy_g21086	-0.37	0.87	-1.35
Ehy_g21090 (PTAC13)	-0.22	0.78	-1.25
Ehy_g21248	-0.13	0.59	-0.77
Ehy_g21710 (LHCB4.1)	-0.3	1.13	-9.08
Ehy_g21867	-0.14	0.76	-1.35
Ehy_g21895 (FLN1)	-0.4	0.92	-1.53
Ehy_g22305	-0.77	1.18	-2.76
Ehy_g22428 (GAPA-2)	-0.24	1.02	-3.04
Ehy_g23758	-0.34	1.06	-3.1
Ehy_g23938	-0.36	0.87	-1.34
Ehy_g24089	-0.33	1.06	-3.03
Ehy_g25017	-0.39	0.99	-1.98
Ehy_g25046	-0.31	0.82	-1.23
Ehy_g25261	-0.21	0.93	-2.12
Ehy_g25539	-0.22	1.1	-10.44
Ehy_g25737	-0.44	0.92	-1.42
Ehy_g26212 (ACP4)	-0.18	0.68	-0.95
Ehy_g26256 (FIB4)	-0.27	0.86	-1.49
Ehy_g26319	-0.24	0.84	-1.46
Ehy_g26325 (FD1)	-0.43	1.1	-3.2
Ehy_g28865 (NTRC)	-0.49	1.07	-2.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.