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  5. Azfi_s0174.g055900

Azfi_s0174.g055900


Description : not classified & original description: CDS=333-1163


Gene families : OG0000573 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0174.g055900
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Adi_g040808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01042 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G004300.1 Ceric.04G004300 not classified & original description: pacid=50631114... 0.03 OrthoFinder output from all 47 species
Ceric.37G070600.1 Ceric.37G070600 not classified & original description: pacid=50615522... 0.06 OrthoFinder output from all 47 species
Cre16.g680700 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01014386001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01018050001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.04 OrthoFinder output from all 47 species
Gb_40778 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58280.2 LOC_Os04g58280 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
MA_10434639g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Msp_g25366 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc12g013700.2.1 Solyc12g013700 Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024286 DUF3700 53 253
No external refs found!