1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g04247

Ehy_g04247


Description : ribosome biogenesis factor *(CRASS) & original description: none


Gene families : OG0007938 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007938_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g04247

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00224760 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G14910 No alias Heavy metal transport/detoxification superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g13367 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g04787 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06536 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060247 No alias ribosome biogenesis factor *(CRASS) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G033000.1 Ceric.01G033000 ribosome biogenesis factor *(CRASS) & original... 0.02 OrthoFinder output from all 47 species
Dac_g12212 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032527001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_22864 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g27100.1 LOC_Os05g27100 ribosome biogenesis factor (CRASS) 0.03 OrthoFinder output from all 47 species
MA_59576g0010 No alias ribosome biogenesis factor (CRASS) 0.04 OrthoFinder output from all 47 species
Mp6g04290.1 No alias ribosome biogenesis factor (CRASS) 0.07 OrthoFinder output from all 47 species
Nbi_g44614 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05841 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c1_25290V3.1 Pp3c1_25290 Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g13302 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13303 No alias ribosome biogenesis factor *(CRASS) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g087150.3.1 Solyc02g087150 ribosome biogenesis factor (CRASS) 0.03 OrthoFinder output from all 47 species
Zm00001e031534_P001 Zm00001e031534 ribosome biogenesis factor (CRASS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!