Azfi_s0111.g045617 (AtWRKY20, WRKY20)

Aliases : AtWRKY20, WRKY20

Description : WRKY-type transcription factor & original description: CDS=1-1599

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0111.g045617
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.02	OrthoFinder output from all 47 species
AT1G66560	ATWRKY64, WRKY64	WRKY DNA-binding protein 64	0.04	OrthoFinder output from all 47 species
AT2G46400	WRKY46, ATWRKY46	WRKY DNA-binding protein 46	0.03	OrthoFinder output from all 47 species
AT4G01720	AtWRKY47, WRKY47	WRKY family transcription factor	0.03	OrthoFinder output from all 47 species
Adi_g021107	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g117756	AtWRKY20, WRKY20	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g09415	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g20989	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g32350	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g63222	WRKY4	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene64694.t1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.31G073500.1	Ceric.31G073500	not classified & original description: pacid=50574451...	0.06	OrthoFinder output from all 47 species
Ehy_g24743	ATWRKY24, WRKY24	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01008553001	WRKY75, ATWRKY75	RNA biosynthesis.transcriptional activation.WRKY...	0.06	OrthoFinder output from all 47 species
Gb_40261	WRKY75, ATWRKY75	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os05g40080.1	WRKY54,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_10434450g0010	WRKY49, ATWRKY49	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_23415g0010	ATWRKY50, WRKY50	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_381058g0010	WRKY18, ATWRKY18	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_934202g0010	WRKY6, ATWRKY6	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Ore_g09070	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g58577	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g02742	ATWRKY50, WRKY50	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020596	ATWRKY71, WRKY71	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023220	WRKY4	WRKY-type transcription factor & original description: CDS=1-1263	0.03	OrthoFinder output from all 47 species
Sam_g08987	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g45089	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g52309	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g113120.4.1	WRKY72,...	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
Solyc09g015770.3.1	ATWRKY70,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc12g011200.3.1	WRKY28,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Solyc12g014610.2.1	AtWRKY20,...	transcription factor (WRKY)	0.05	OrthoFinder output from all 47 species
Solyc12g056745.1.1	ATWRKY51,...	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species
Zm00001e020229_P002	ATWRKY71,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e031901_P001	WRKY33,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e034148_P001	ATWRKY40,...	transcription factor (WRKY)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	465	521
IPR003657	WRKY_dom	291	345

External Links

No external refs found!

Azfi_s0111.g045617 (AtWRKY20, WRKY20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation