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Aliases : STM, SHM1, SHMT1
Description : EC_2.1 transferase transferring one-carbon group & original description: CDS=213-1556
Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0102.g044437 | |
| Cluster | HCCA: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00046p00219150 | STM, SHM1,... | Photosynthesis.photorespiration.serine hydroxymethyltransferase | 0.1 | OrthoFinder output from all 47 species | |
| AT4G13890 | SHM5, EDA37, EDA36 | Pyridoxal phosphate (PLP)-dependent transferases... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G37930 | STM, SHM1, SHMT1 | serine transhydroxymethyltransferase 1 | 0.12 | OrthoFinder output from all 47 species | |
| Adi_g081286 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.08 | OrthoFinder output from all 47 species | |
| Aev_g09895 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06688 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g06300 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.11 | OrthoFinder output from all 47 species | |
| Aob_g16059 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11376 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.11 | OrthoFinder output from all 47 species | |
| Aspi01Gene56437.t1 | STM, SHM1,... | EC_2.1 transferase transferring one-carbon group &... | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g12674 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.28G027700.1 | STM, SHM1,... | EC_2.1 transferase transferring one-carbon group &... | 0.09 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001130.31 | SHM4 | Enzyme classification.EC_2 transferases.EC_2.1... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g28484 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g14554 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g21464 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g20927 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g16256 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01003859001 | STM, SHM1, SHMT1 | Photosynthesis.photorespiration.serine hydroxymethyltransferase | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g52840.1 | STM, SHM1,... | serine hydroxymethyltransferase | 0.06 | OrthoFinder output from all 47 species | |
| Len_g12401 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g04055 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_99276g0010 | STM, SHM1, SHMT1 | serine hydroxymethyltransferase | 0.06 | OrthoFinder output from all 47 species | |
| Mp2g08370.1 | STM, SHM1, SHMT1 | serine hydroxymethyltransferase | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g48544 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.12 | OrthoFinder output from all 47 species | |
| Nbi_g03063 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.12 | OrthoFinder output from all 47 species | |
| Ore_g09056 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g10887 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g14402 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g36946 | No alias | EC_2.1 transferase transferring one-carbon group &... | 0.07 | OrthoFinder output from all 47 species | |
| Smo270566 | STM, SHM1, SHMT1 | Photosynthesis.photorespiration.serine hydroxymethyltransferase | 0.09 | OrthoFinder output from all 47 species | |
| Solyc02g091560.3.1 | STM, SHM1,... | serine hydroxymethyltransferase | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g16771 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g10060 | STM, SHM1, SHMT1 | EC_2.1 transferase transferring one-carbon group &... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004096 | catalase activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | HCCA |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| MF | GO:0016851 | magnesium chelatase activity | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0051002 | ligase activity, forming nitrogen-metal bonds | IEP | HCCA |
| MF | GO:0051003 | ligase activity, forming nitrogen-metal bonds, forming coordination complexes | IEP | HCCA |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
| No external refs found! |