1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0090.g042685

Azfi_s0090.g042685


Description : not classified & original description: CDS=7-1914


Gene families : OG0006336 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006336_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0090.g042685
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Aev_g01321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g09060.1 No alias Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder output from all 47 species
Pir_g20053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0034511 U3 snoRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 411 607
IPR041677 DNA2/NAM7_AAA_11 188 402
No external refs found!