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Aliases : ATRNL, AtRLG1, RNL
Description : multifunctional tRNA ligase *(RLG1) & original description: CDS=1720-3543
Gene families : OG0002159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002159_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0072.g036985 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Als_g23404 | ATRNL, AtRLG1, RNL | multifunctional tRNA ligase *(RLG1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g17689 | ATRNL, AtRLG1, RNL | multifunctional tRNA ligase *(RLG1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G059600.1 | ATRNL, AtRLG1,... | multifunctional tRNA ligase *(RLG1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G059900.1 | ATRNL, AtRLG1,... | multifunctional tRNA ligase *(RLG1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre07.g352800 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g07533 | ATRNL, AtRLG1, RNL | multifunctional tRNA ligase *(RLG1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_26327 | ATRNL, AtRLG1, RNL | tRNA ligase 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05888 | ATRNL, AtRLG1, RNL | multifunctional tRNA ligase *(RLG1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15162 | ATRNL, AtRLG1, RNL | multifunctional tRNA ligase *(RLG1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0018.g007535 | ATRNL, AtRLG1, RNL | multifunctional tRNA ligase *(RLG1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12368 | No alias | multifunctional tRNA ligase *(RLG1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo186974 | ATRNL, AtRLG1, RNL | tRNA ligase 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006177 | GMP biosynthetic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | HCCA |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0046037 | GMP metabolic process | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |