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  5. Azfi_s0065.g035945

Azfi_s0065.g035945


Description : component *(eIF3d) of eIF3 mRNA-to-PIC binding complex & original description: CDS=1-1668


Gene families : OG0003519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0065.g035945
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000142.3 No alias Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
Cre05.g242300 No alias Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
LOC_Os05g49150.1 LOC_Os05g49150 component eIF3d of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Mp4g09070.1 No alias component eIF3d of eIF3 mRNA-to-PIC binding complex 0.06 OrthoFinder output from all 47 species
Nbi_g06687 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Sam_g17060 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.06 OrthoFinder output from all 47 species
Spa_g09748 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Tin_g02041 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Zm00001e032448_P001 Zm00001e032448 component eIF3d of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007783 eIF3d 8 512
No external refs found!