Aliases : ATH5, ATTRX5, TRX5, LIV1
Description : H-type thioredoxin *(Trx-H) & original description: CDS=7-366
Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G39950 | TRXH2, TRX2,... | thioredoxin 2 | 0.05 | OrthoFinder output from all 47 species | |
Als_g04612 | ATH9, TH9, TRX H9 | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cre09.g391900 | ATTRX4, ATH4 | Redox homeostasis.cytosol/mitochondrion/nucleus redox... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g18883 | ATH9, TH9, TRX H9 | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g51844 | No alias | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g006830.3.1 | TRXH2, TRX2,... | H-type thioredoxin | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e011851_P001 | TRXH2, TRX2,... | H-type thioredoxin | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
CC | GO:0005886 | plasma membrane | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013766 | Thioredoxin_domain | 23 | 110 |
No external refs found! |