1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0063.g035336

Azfi_s0063.g035336


Description : transcriptional co-regulator *(Oberon) & original description: CDS=148-4572


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0063.g035336
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00014560 evm_27.TU.AmTr_v1... Protein OBERON 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00028p00190780 OBE2,... OBERON-like protein OS=Nicotiana benthamiana 0.03 OrthoFinder output from all 47 species
AT3G07780 OBE1 Protein of unknown function (DUF1423) 0.04 OrthoFinder output from all 47 species
Adi_g066797 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13762 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Als_g23885 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72655.t1 OBE1, Aspi01Gene72655 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g07773 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g22990 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02961 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07963 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g27694 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g13590.1 LOC_Os03g13590 no description available(sp|q10pc5|tta1_orysj : 1188.0) 0.02 OrthoFinder output from all 47 species
LOC_Os12g32980.1 OBE2, LOC_Os12g32980 OBERON-like protein OS=Nicotiana benthamiana... 0.06 OrthoFinder output from all 47 species
MA_105216g0010 No alias Protein OBERON 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_82295g0010 No alias no description available(sp|q10pc5|tta1_orysj : 95.1) 0.03 OrthoFinder output from all 47 species
Mp1g16320.1 No alias OBERON-like protein OS=Nicotiana benthamiana... 0.04 OrthoFinder output from all 47 species
Msp_g40697 OBE1 transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g29630 No alias transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g24330 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g27832 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Sam_g36358 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Smo158800 OBE2 OBERON-like protein OS=Nicotiana benthamiana 0.02 OrthoFinder output from all 47 species
Solyc05g018500.3.1 Solyc05g018500 Protein OBERON 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g047780.3.1 OBE2, Solyc07g047780 OBERON-like protein OS=Nicotiana benthamiana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032535 Oberon_cc 1219 1336
IPR032881 Oberon_PHD 989 1123
No external refs found!