1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0059.g034708

Azfi_s0059.g034708


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: CDS=1-501


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0059.g034708
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT3G60966 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G20885 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Als_g36432 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g11831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61901.t1 Aspi01Gene61901 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0056.g034025 No alias not classified & original description: CDS=511-789 0.04 OrthoFinder output from all 47 species
Cba_g29676 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Cba_g38589 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.01G091800.1 Ceric.01G091800 not classified & original description: pacid=50591615... 0.03 OrthoFinder output from all 47 species
Ceric.09G091300.1 Ceric.09G091300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.17G012000.1 Ceric.17G012000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G021000.1 Ceric.22G021000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.25G039000.1 Ceric.25G039000 not classified & original description: pacid=50594534... 0.04 OrthoFinder output from all 47 species
Ceric.25G065700.1 Ceric.25G065700 not classified & original description: pacid=50593844... 0.04 OrthoFinder output from all 47 species
Dac_g39871 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g08522 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02621 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14821 BRH1 RHA2 signal transducer of abscisic acid perception 0.02 OrthoFinder output from all 47 species
Gb_28980 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g64620.1 LOC_Os01g64620 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g30020.1 LOC_Os03g30020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g57410.1 LOC_Os03g57410 Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g12680.1 LOC_Os06g12680 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os06g34640.1 LOC_Os06g34640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g12736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10021g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_10244600g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_111727g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_152102g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_201391g0010 BRH1 Probable E3 ubiquitin-protein ligase RHA1A... 0.03 OrthoFinder output from all 47 species
MA_462422g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6475030g0010 ATL3 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_69343g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_711804g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_80729g0030 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_83882g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g04600.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g04641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24015 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ore_g16147 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g50189 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g05782 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g09130 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g18666 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g21936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023101 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025249 No alias not classified & original description: CDS=1-534 0.03 OrthoFinder output from all 47 species
Sam_g28688 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Smo172324 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc04g074790.3.1 Solyc04g074790 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc06g049030.4.1 Solyc06g049030 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g076830.1.1 Solyc08g076830 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g005320.1.1 Solyc11g005320 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc11g010330.3.1 Solyc11g010330 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc12g094690.1.1 Solyc12g094690 RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g16053 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g02554 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e015445_P001 BRH1, Zm00001e015445 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023585_P001 Zm00001e023585 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 102 144
No external refs found!