1. Home
  2. Species
  3. Azolla filiculoides
  4. Sequence
  5. Azfi_s0038.g026341

Azfi_s0038.g026341


Description : GTPase effector *(BDR) & original description: CDS=255-1508


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0038.g026341
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00115060 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G79420 No alias Protein of unknown function (DUF620) 0.05 OrthoFinder output from all 47 species
AT5G06610 No alias Protein of unknown function (DUF620) 0.03 OrthoFinder output from all 47 species
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03158 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35641 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09619 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49886.t1 Aspi01Gene49886 GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61705.t1 Aspi01Gene61705 GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene69938.t1 Aspi01Gene69938 GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02214 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g41584 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016395001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01036716001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os03g16060.1 LOC_Os03g16060 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
LOC_Os07g40150.1 LOC_Os07g40150 GTPase effector (BDR) 0.05 OrthoFinder output from all 47 species
LOC_Os10g27110.1 LOC_Os10g27110 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
LOC_Os10g27120.1 LOC_Os10g27120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39160.1 LOC_Os12g39160 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Len_g04316 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01877 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14366 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_21627g0010 No alias GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Msp_g15164 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15972 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01139 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g01533 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14827 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47866 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01193 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001181_P001 Zm00001e001181 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Zm00001e003042_P002 Zm00001e003042 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Zm00001e010682_P001 Zm00001e010682 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Zm00001e012456_P001 Zm00001e012456 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Zm00001e035436_P001 Zm00001e035436 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Zm00001e038067_P001 Zm00001e038067 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 135 374
No external refs found!