Heatmap: Cluster_49 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Vegetative Sporophyte
Adult Sporophyte
Leaf (0 mg/L NH4NO3)
Leaf (30 mg/L NH4NO3)
Leaf (90 mg/L NH4NO3)
Sporophyte; w/o NH4NO3, w/o cyanobacteria
Sporophyte; w/o NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w cyanobacteria
Sporophyte; w NH4NO3, w/o cyanobacteria
Root Tip, D-3 6h mock treated
Root Tip, D-3 6h 0.1 uM IAA treated
Root Tip, D-3 6h 0.5 uM trans-zeatin treated
Microsporocarp
-0.67 1.16 -2.14 -3.14 -1.48 -0.43 -0.69 -0.41 0.01 1.02 1.07 0.88 -1.54
-3.93 -0.41 -0.28 -0.72 -0.17 - -3.9 -4.82 -4.16 2.0 0.98 1.82 -2.18
-0.78 0.95 -0.44 -1.09 -0.19 0.28 -0.48 -1.39 -1.72 0.82 0.59 1.2 -2.13
-0.75 1.04 -0.82 -1.27 -0.46 -0.02 -0.62 -1.55 -0.32 0.96 0.5 0.77 -0.33
-3.6 0.01 0.21 0.62 -0.78 -4.68 -1.68 -4.29 -5.73 2.03 0.82 1.2 -4.01
-0.46 0.82 -1.46 -1.22 -0.79 -0.07 -0.29 -0.38 -0.11 0.75 0.61 0.77 -0.39
-0.59 0.62 -0.95 -0.78 -0.27 -0.31 -0.52 -0.61 -0.25 0.73 0.78 0.87 -0.58
-0.36 0.26 -2.12 -2.13 -1.31 0.0 -0.67 -0.75 -1.12 1.22 1.23 1.33 -1.77
-5.05 0.69 - - - - - - -3.07 2.53 1.07 1.75 -
-1.06 0.89 -0.81 -0.67 0.01 -0.78 -0.85 -1.09 -1.14 1.1 0.85 1.14 -2.03
-0.39 -0.03 -3.58 -3.95 -2.48 -0.13 -0.43 -0.85 -1.05 1.57 1.15 1.41 -1.29
0.04 0.23 -1.18 -1.6 -0.48 -0.59 -0.46 -0.69 -0.99 1.31 1.07 1.11 -3.83
-0.66 1.13 -0.52 -0.59 0.06 -0.76 -1.03 -1.1 -0.76 0.83 0.8 0.85 -1.69
-0.27 0.62 -0.18 -0.27 0.32 -0.07 -0.32 -0.56 -0.23 0.5 0.34 0.55 -1.96
-0.54 0.96 -0.95 -0.26 -0.35 -0.82 -0.98 -0.71 -1.58 1.07 0.7 1.17 -1.95
-0.3 0.49 -0.4 -0.53 -0.17 0.27 -0.04 -0.12 -0.21 0.6 0.49 0.53 -3.06
-0.27 0.92 -0.7 -0.89 -0.82 -0.07 -0.28 -0.4 -0.39 0.73 0.68 0.76 -1.7
-0.73 0.63 -0.49 -0.52 0.46 -1.02 -1.14 -1.21 -0.8 0.98 0.81 0.88 -0.86
-0.48 0.77 -1.72 -1.39 -1.33 -0.13 -0.52 -0.92 0.34 0.9 0.91 1.06 -1.97
-1.08 1.18 -0.93 -0.9 -0.24 -1.22 -1.44 -2.05 -1.89 1.04 1.18 1.13 -0.94
-0.29 0.99 -0.96 -0.87 -0.37 -1.1 -1.07 -1.08 -0.67 0.87 0.84 0.75 0.03
-0.9 0.71 -1.99 -2.04 -1.56 -0.12 -0.4 -0.71 -0.36 1.17 0.99 1.08 -0.79
-3.43 0.98 -5.67 -4.46 -2.71 - -4.64 -6.08 - 2.0 1.58 1.8 -2.25
-0.92 0.47 -1.4 -2.0 -3.55 -0.95 -0.49 -1.0 -0.83 1.5 1.32 0.92 -0.2
-0.55 0.37 -1.75 -1.81 -1.06 -0.37 -0.55 -0.52 -0.24 1.22 1.11 1.19 -2.46
-0.54 0.51 -1.23 -0.63 -0.45 -0.57 -0.76 -0.81 -0.73 0.97 1.03 0.98 -0.6
-0.35 0.84 -2.48 -1.87 -0.58 -0.55 -0.76 -0.78 -0.36 0.79 1.3 0.93 -0.79
-0.58 0.63 -0.5 -0.34 -0.34 -1.97 -1.16 -1.47 -1.6 1.1 1.36 0.97 -1.25
-0.37 0.57 -3.36 -3.13 -2.96 -0.63 -1.32 -2.3 -2.13 1.66 1.55 1.32 -1.54
-0.2 0.25 -1.49 -1.26 -0.9 -0.4 -0.49 -0.64 -0.78 0.98 1.02 1.11 -0.35
-1.16 -0.0 -0.52 -1.58 -0.63 -0.14 -0.27 -0.01 0.13 0.86 0.98 0.87 -1.2
-0.68 0.26 -0.93 -1.0 -0.18 -0.13 -0.57 -0.68 -0.63 0.91 0.97 0.97 -0.71
-1.13 0.76 -1.09 -1.35 -0.19 -1.72 -1.37 -1.42 -0.73 1.22 1.08 1.44 -1.85
-0.57 0.47 -0.67 -0.77 0.06 -0.59 -0.68 -0.21 0.09 0.72 0.74 0.94 -2.07
-1.12 0.79 -1.37 -1.33 0.12 0.18 -0.4 -0.92 -0.59 0.92 0.56 0.96 -0.86
-1.64 1.31 -0.52 -0.55 -0.48 -1.81 -1.77 -2.07 -1.96 1.11 1.01 1.44 -2.68
-0.97 0.37 -0.81 -0.89 -0.55 -0.29 -0.59 -0.11 -0.22 1.09 1.13 0.81 -3.84
-1.21 0.96 -0.82 -0.7 -1.25 -1.9 -2.63 -3.23 -3.22 1.51 1.49 1.36 -2.51
-0.2 0.12 -0.71 -0.46 -0.08 0.19 0.02 0.02 -0.04 0.59 0.45 0.58 -1.98
-0.36 0.31 -0.58 -0.64 -0.2 0.09 -0.08 -0.25 0.24 0.53 0.48 0.6 -1.27
-0.68 0.66 -0.25 -0.15 -0.27 -0.37 -0.36 -0.3 -0.54 0.61 0.47 0.5 -0.25
-0.64 1.47 -1.49 -1.34 0.15 -0.62 -2.1 -3.0 -1.9 1.26 0.81 0.95 -1.41
-0.23 0.63 -0.9 -0.87 -0.61 -0.09 -0.05 -0.3 -0.18 0.78 0.58 0.85 -1.93
-1.33 0.99 -0.66 -0.8 0.41 -1.77 -2.38 -2.62 -1.51 1.3 0.96 1.32 -2.52
-0.28 1.58 - - - -1.13 -1.45 -1.67 -1.6 1.28 1.15 1.12 -0.16
-0.92 0.38 -1.5 -1.84 -1.8 0.84 -0.14 -1.04 -0.54 0.99 0.76 1.34 -2.41
-0.75 0.4 -1.36 -0.33 0.06 -0.62 -0.92 -0.65 -0.36 0.99 1.14 0.91 -2.38
-0.99 1.07 -0.11 -0.96 -0.91 -0.71 -1.56 -2.57 -0.96 0.99 1.41 0.93 -2.01
-1.15 1.0 -1.09 -0.4 1.07 -0.82 -1.02 -1.18 -0.37 0.68 0.7 0.62 -2.49
-0.73 0.5 -0.72 0.02 -0.29 -0.44 -0.31 -0.12 -0.18 0.67 0.75 0.65 -1.46
-0.02 0.63 -0.54 -1.48 -0.32 -0.15 -0.41 -0.57 -0.14 0.62 0.69 0.66 -0.61
-0.39 0.74 -2.02 -2.03 -0.96 -0.67 -1.09 -1.2 -1.37 1.29 1.38 1.32 -3.37
-0.33 0.58 -0.12 -0.25 -0.17 -0.33 -0.47 -0.45 -0.32 0.53 0.59 0.67 -1.13
-0.99 0.55 -1.51 -0.94 -1.25 -4.89 -3.8 -7.04 -5.16 2.02 1.08 1.73 -2.97
-0.28 0.92 -2.8 -3.2 -2.58 -0.94 -0.89 -1.42 -1.47 1.5 1.4 1.3 -2.76
-1.04 0.37 -0.53 -0.18 0.25 -0.66 -0.65 -0.48 -0.25 0.85 0.71 0.95 -1.95
-0.29 0.5 -1.66 -1.63 -1.81 0.59 0.1 -0.31 0.1 0.74 0.76 0.79 -1.71
-0.57 0.7 -0.54 -0.58 0.2 -0.2 -0.45 -0.55 -0.02 0.7 0.43 0.71 -1.68
-0.88 0.88 -4.19 -4.68 -2.56 -1.18 -0.53 -0.58 -0.58 1.49 1.36 1.23 -2.64
-4.02 0.94 - - - - - -1.03 - 2.32 0.85 1.9 -
-0.61 0.52 -1.19 -0.71 -0.15 -0.32 -0.63 -0.81 -0.79 0.96 0.97 1.08 -1.49
-0.1 0.58 - - - 0.04 0.21 -0.07 -0.19 1.28 0.87 1.07 -2.38
-0.74 0.22 -1.2 -0.73 -0.28 -0.91 -0.79 -0.86 -0.85 1.23 1.0 1.32 -1.66
-0.28 0.5 -0.69 -1.05 -0.24 -0.19 -0.05 -0.19 0.05 0.57 0.6 0.61 -0.91
-1.44 1.13 -0.46 -1.56 0.44 -3.17 -5.09 - -3.41 1.36 1.3 1.42 -3.92
-0.61 0.43 -0.4 -0.54 -0.04 -0.47 -0.76 -1.12 -0.72 0.86 0.86 0.98 -0.77
-3.78 -0.52 -2.18 -1.81 -0.46 -0.93 -0.57 0.02 0.38 1.71 0.41 1.48 -3.32
-0.21 0.74 -0.15 -0.41 -0.51 -1.21 -0.86 -1.04 -1.22 0.99 0.88 1.0 -1.39
-0.71 0.52 -0.66 -0.54 -0.01 -0.45 -0.54 -0.64 -0.54 0.9 0.83 0.91 -1.49
-0.26 0.38 -1.18 -0.69 -0.68 -0.47 -0.47 -0.44 -0.59 1.01 0.77 1.14 -1.26
-0.3 0.57 -5.57 - - -0.18 -0.31 -0.49 -0.21 1.09 1.13 1.12 -0.13
-0.21 0.39 -0.54 -0.58 -0.12 -0.01 -0.12 -0.23 -0.28 0.75 0.52 0.66 -1.92
-0.85 1.72 - - - -3.06 -3.25 - -1.42 1.5 1.3 1.43 -0.86
-0.25 0.57 -2.54 -3.2 -2.23 0.27 -0.27 -0.47 -0.57 1.19 1.09 1.05 -1.89
-2.23 0.73 -1.44 -1.6 -1.5 -1.39 -1.91 -2.02 -1.04 1.48 1.63 1.26 -1.2
-0.4 0.7 -2.56 -2.77 -1.22 -2.47 -1.87 -1.74 -1.76 1.51 1.61 1.5 -3.31
-0.79 0.05 -1.32 -0.76 -0.47 0.21 0.01 -0.6 -0.73 0.67 1.21 1.23 -
-2.1 0.56 -3.72 -2.85 -1.74 -2.21 -2.22 -2.36 -3.01 1.43 1.9 1.73 -1.88
-1.11 0.63 -2.13 -1.66 -1.1 -0.19 -0.43 -0.76 -1.02 1.38 1.2 1.24 -5.81
-0.3 0.98 -1.13 -1.61 -1.07 -2.82 -1.71 -2.46 -3.29 1.52 1.36 1.39 -2.6
-0.23 0.57 -2.93 -3.18 -2.35 -1.6 0.06 -1.12 -2.24 1.51 0.95 1.53 -0.95
-0.05 0.88 - - - -0.62 -0.18 0.08 -0.43 1.28 1.04 1.2 -3.8
-0.22 0.87 -1.85 -1.47 -1.23 -0.83 -1.15 -0.82 -1.3 1.24 1.19 1.19 -1.57
-0.56 0.64 -0.18 -0.15 0.09 -0.37 -1.18 -2.51 -0.22 0.84 0.78 0.77 -1.13
-1.0 1.01 -0.17 -0.46 -0.03 -0.91 -0.86 -1.22 -0.67 0.8 0.8 0.86 -1.11
-0.77 0.89 -0.58 -1.73 0.48 -0.62 -1.23 -1.72 -1.28 1.0 1.01 1.12 -2.15
-2.26 1.55 -1.5 -2.3 -0.88 -2.4 -2.58 -2.43 -2.92 1.49 1.13 1.55 -2.55
-2.08 1.7 -1.91 -2.38 -1.25 -3.41 -2.87 -2.82 -2.31 1.54 1.32 1.35 -3.49
-0.29 0.5 -1.66 -1.63 -1.81 0.59 0.1 -0.31 0.1 0.74 0.76 0.79 -1.71
-0.68 1.24 -2.92 -3.07 -1.2 -0.36 -0.77 -1.04 -0.56 1.31 0.75 1.36 -3.68
-0.39 0.48 -1.17 -2.02 -3.49 -0.48 -0.96 -1.68 -1.32 1.33 1.41 1.45 -2.22

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.