Azfi_s0038.g026263

Description : subunit beta2 of coat protein complex & original description: CDS=293-3112

Gene families : OG0002111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002111_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0038.g026263
Cluster	HCCA: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00142p00013680	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.03	OrthoFinder output from all 47 species
AT1G79990	No alias	structural molecules	0.03	OrthoFinder output from all 47 species
Aev_g13025	No alias	subunit beta2 of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Ala_g02602	No alias	subunit beta2 of coat protein complex & original...	0.05	OrthoFinder output from all 47 species
Als_g04780	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g23307	No alias	subunit beta2 of coat protein complex & original...	0.02	OrthoFinder output from all 47 species
Aob_g06720	No alias	subunit beta2 of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Aop_g12571	No alias	subunit beta2 of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene49512.t1	Aspi01Gene49512	subunit beta2 of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Ceric.30G060200.1	Ceric.30G060200	subunit beta2 of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Dac_g05778	No alias	subunit beta2 of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Dcu_g04083	No alias	subunit beta2 of coat protein complex & original...	0.07	OrthoFinder output from all 47 species
GSVIVT01017121001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.05	OrthoFinder output from all 47 species
LOC_Os02g11830.2	LOC_Os02g11830	subunit beta2 of coat protein complex	0.07	OrthoFinder output from all 47 species
LOC_Os06g05180.3	LOC_Os06g05180	Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica...	0.07	OrthoFinder output from all 47 species
Len_g12266	No alias	subunit beta2 of coat protein complex & original...	0.03	OrthoFinder output from all 47 species
Lfl_g05710	No alias	subunit beta2 of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Mp3g04060.1	No alias	subunit beta2 of coat protein complex	0.03	OrthoFinder output from all 47 species
Pir_g14528	No alias	subunit beta2 of coat protein complex & original...	0.04	OrthoFinder output from all 47 species
Pir_g32312	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc03g120270.4.1	Solyc03g120270	subunit beta2 of coat protein complex	0.04	OrthoFinder output from all 47 species
Solyc12g043000.3.1	Solyc12g043000	subunit beta2 of coat protein complex	0.04	OrthoFinder output from all 47 species
Zm00001e014494_P001	Zm00001e014494	subunit beta2 of coat protein complex	0.02	OrthoFinder output from all 47 species
Zm00001e024969_P001	Zm00001e024969	subunit beta2 of coat protein complex	0.04	OrthoFinder output from all 47 species
Zm00001e030001_P002	Zm00001e030001	subunit beta2 of coat protein complex	0.06	OrthoFinder output from all 47 species
Zm00001e036524_P002	Zm00001e036524	subunit beta2 of coat protein complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	HCCA
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
BP	GO:0006099	tricarboxylic acid cycle	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	HCCA
BP	GO:0015977	carbon fixation	IEP	HCCA
MF	GO:0016229	steroid dehydrogenase activity	IEP	HCCA
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006692	Coatomer_WD-assoc_reg	327	783
IPR001680	WD40_repeat	134	171
IPR001680	WD40_repeat	59	85
IPR001680	WD40_repeat	220	256
IPR001680	WD40_repeat	91	127
IPR001680	WD40_repeat	177	215

External Links

No external refs found!

Azfi_s0038.g026263

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation