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  5. Azfi_s0017.g014468

Azfi_s0017.g014468


Description : not classified & original description: CDS=1-2799


Gene families : OG0005880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0017.g014468
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Als_g50338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g685200 No alias No description available 0.03 OrthoFinder output from all 47 species
Ehy_g07881 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e041627_P001 Zm00001e041627 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e042214_P001 Zm00001e042214 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 393 463
IPR000504 RRM_dom 54 122
IPR000504 RRM_dom 711 786
IPR000504 RRM_dom 811 879
IPR000504 RRM_dom 590 649
No external refs found!