Azfi_s0016.g014219

Description : light chain of clathrin triskelion & original description: CDS=160-1512

Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0016.g014219

Target	Alias	Description	ECC score	Gene Family Method
Ehy_g03560	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Gb_14357	No alias	light chain of clathrin triskelion	0.03	OrthoFinder output from all 47 species
LOC_Os07g27750.1	LOC_Os07g27750	light chain of clathrin triskelion	0.02	OrthoFinder output from all 47 species
Len_g30485	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017186	No alias	light chain of clathrin triskelion & original...	0.04	OrthoFinder output from all 47 species
Solyc07g054180.4.1	Solyc07g054180	light chain of clathrin triskelion	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030118	clathrin coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030125	clathrin vesicle coat	None	Extended
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEA	Interproscan
CC	GO:0030132	clathrin coat of coated pit	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
MF	GO:0070001	aspartic-type peptidase activity	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
CC	GO:1902554	serine/threonine protein kinase complex	IEP	HCCA
CC	GO:1902911	protein kinase complex	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
CC	GO:1990316	Atg1/ULK1 kinase complex	IEP	HCCA
MF	GO:1990380	K48-linked deubiquitinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000996	Clathrin_L-chain	288	409

External Links

No external refs found!